Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYP46A1Q9Y6A2 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 RN7SL399P-201ENST00000471648 279 ntBASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 RFPL4AP1-201ENST00000530883 850 ntBASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 GPALPP1-207ENST00000611650 899 ntBASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CYP46A1Q9Y6A2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CYP46A1Q9Y6A2 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CYP46A1Q9Y6A2 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.14■□□□□ 0.5
CYP46A1Q9Y6A2 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CYP46A1Q9Y6A2 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CYP46A1Q9Y6A2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.14■□□□□ 0.5
CYP46A1Q9Y6A2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CYP46A1Q9Y6A2 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CYP46A1Q9Y6A2 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
CYP46A1Q9Y6A2 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 AL136379.1-201ENST00000623471 2642 ntBASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 AL157414.3-201ENST00000624276 1954 ntBASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 SPDYE19P-201ENST00000338590 713 ntBASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 AC026410.3-201ENST00000514280 936 ntBASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 AL049840.4-201ENST00000602422 811 ntBASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CYP46A1Q9Y6A2 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CYP46A1Q9Y6A2 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CYP46A1Q9Y6A2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.13■□□□□ 0.49
CYP46A1Q9Y6A2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CYP46A1Q9Y6A2 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CYP46A1Q9Y6A2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.13■□□□□ 0.49
CYP46A1Q9Y6A2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CYP46A1Q9Y6A2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC18.13■□□□□ 0.49
CYP46A1Q9Y6A2 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CYP46A1Q9Y6A2 AC018529.2-202ENST00000611482 3087 ntBASIC18.13■□□□□ 0.49
CYP46A1Q9Y6A2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CYP46A1Q9Y6A2 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CYP46A1Q9Y6A2 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CYP46A1Q9Y6A2 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CYP46A1Q9Y6A2 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.13■□□□□ 0.49
CYP46A1Q9Y6A2 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CYP46A1Q9Y6A2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CYP46A1Q9Y6A2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.13■□□□□ 0.49
CYP46A1Q9Y6A2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.13■□□□□ 0.49
CYP46A1Q9Y6A2 AC092183.1-201ENST00000469884 875 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms