Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PCDHA4Q9UN74 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 SLC25A47P1-201ENST00000531577 414 ntBASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA4Q9UN74 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 AC055811.4-201ENST00000624039 1754 ntBASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 GAPDHP21-201ENST00000450301 1010 ntBASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 KRT17P7-201ENST00000451704 1104 ntBASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 AC106760.1-201ENST00000508690 800 ntBASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 AC145423.3-201ENST00000615987 467 ntBASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHA4Q9UN74 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHA4Q9UN74 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.39■□□□□ 0.38
PCDHA4Q9UN74 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHA4Q9UN74 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHA4Q9UN74 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHA4Q9UN74 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHA4Q9UN74 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.39■□□□□ 0.38
PCDHA4Q9UN74 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.39■□□□□ 0.38
PCDHA4Q9UN74 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHA4Q9UN74 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHA4Q9UN74 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms