Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC093525.7-201ENST00000569852 3626 ntBASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 MICA-210ENST00000616296 2260 ntTSL 5 BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 AP3S2-216ENST00000617003 1561 ntBASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 AC012676.5-201ENST00000624337 1955 ntBASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 IGHG2-202ENST00000641095 2594 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
CDC42SE1Q9NRR8 ZAN-207ENST00000620596 8396 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
CDC42SE1Q9NRR8 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
CDC42SE1Q9NRR8 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
CDC42SE1Q9NRR8 HAUS5-201ENST00000203166 4283 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
CDC42SE1Q9NRR8 SPRTN-202ENST00000295050 3468 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
CDC42SE1Q9NRR8 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
CDC42SE1Q9NRR8 TESK2-202ENST00000372086 3074 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
CDC42SE1Q9NRR8 AP3S2-201ENST00000336418 5891 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
CDC42SE1Q9NRR8 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
CDC42SE1Q9NRR8 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 DNAI2-202ENST00000446837 2474 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 SCN4B-201ENST00000324727 4484 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 FAM200B-223ENST00000622362 4377 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 MPP2-202ENST00000377184 4206 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 NCLP1-201ENST00000445357 1963 ntBASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 GUCY2EP-203ENST00000531117 1918 ntBASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 GHET1-201ENST00000627071 1906 ntBASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 AC090505.1-201ENST00000430515 1834 ntBASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 NUMB-212ENST00000554546 3607 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 ESR1-207ENST00000440973 6466 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 EIF3A-203ENST00000541549 4495 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 LINC00167-201ENST00000530583 1419 ntBASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 KCNA4-201ENST00000328224 4172 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 ZNF423-204ENST00000562520 4018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 KLF11-206ENST00000540845 3885 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 LINC01238-205ENST00000567549 1107 ntBASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 TIGAR-204ENST00000635110 3633 ntTSL 5 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 CAT-201ENST00000241052 2302 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 COL8A1-201ENST00000261037 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 LILRB2-204ENST00000391749 2286 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 AC072061.1-201ENST00000569710 2234 ntBASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 RIMS2-207ENST00000504942 4228 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 CADM2-201ENST00000383699 9488 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 TSPEAR-204ENST00000614657 4027 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 NLRP7-206ENST00000588756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 FOSB-206ENST00000586615 3774 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 333.4 ms