RNA–Protein interactions for RNA: ENST00000328224.6

KCNA4-201, Transcript of potassium voltage-gated channel subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCNA4, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA4-201ENST00000328224 DCAF8L2P0C7V8 631 aa20.68■□□□□ 0.9
KCNA4-201ENST00000328224 SUPT5HO00267 1087 aaKnown RBP20.35■□□□□ 0.85
KCNA4-201ENST00000328224 NISCHQ9Y2I1 1504 aa20.2■□□□□ 0.82
KCNA4-201ENST00000328224 SHROOM4Q9ULL8 1493 aa19.96■□□□□ 0.79
KCNA4-201ENST00000328224 EHMT2Q96KQ7 1210 aa19.65■□□□□ 0.74
KCNA4-201ENST00000328224 PCGF6Q9BYE7 350 aa19.53■□□□□ 0.72
KCNA4-201ENST00000328224 FAM9AQ8IZU1 332 aaPredicted RBP19.18■□□□□ 0.66
KCNA4-201ENST00000328224 TTBK1Q5TCY1 1321 aaPredicted RBP19.03■□□□□ 0.64
KCNA4-201ENST00000328224 PELP1Q8IZL8 1130 aaKnown RBP18.88■□□□□ 0.61
KCNA4-201ENST00000328224 HRCP23327 699 aa18.79■□□□□ 0.6
KCNA4-201ENST00000328224 CENPBP07199 599 aaPredicted RBP18.75■□□□□ 0.59
KCNA4-201ENST00000328224 ZEB1P37275 1124 aaPredicted RBP18.74■□□□□ 0.59
KCNA4-201ENST00000328224 CCER1Q8TC90 406 aaPredicted RBP18.74■□□□□ 0.59
KCNA4-201ENST00000328224 APLP2Q06481 763 aa18.69■□□□□ 0.58
KCNA4-201ENST00000328224 TRIM41Q8WV44 630 aa18.66■□□□□ 0.58
KCNA4-201ENST00000328224 PPARGC1BQ86YN6 1023 aaKnown RBP18.66■□□□□ 0.58
KCNA4-201ENST00000328224 YTHDC1Q96MU7 727 aaKnown RBP18.58■□□□□ 0.56
KCNA4-201ENST00000328224 LOC105371045A0A1W2PR82 267 aa18.53■□□□□ 0.56
KCNA4-201ENST00000328224 RANGAP1P46060 587 aaPredicted RBP18.52■□□□□ 0.56
KCNA4-201ENST00000328224 TRIM26Q12899 539 aaPredicted RBP18.49■□□□□ 0.55
KCNA4-201ENST00000328224 CHIC1Q5VXU3 224 aa18.45■□□□□ 0.54
KCNA4-201ENST00000328224 UBTFP17480 764 aaKnown RBP18.3■□□□□ 0.52
KCNA4-201ENST00000328224 MYT1Q01538 1121 aa18.24■□□□□ 0.51
KCNA4-201ENST00000328224 ERICH6Q7L0X2 663 aa18.24■□□□□ 0.51
KCNA4-201ENST00000328224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.09■□□□□ 0.49
KCNA4-201ENST00000328224 ATP1B4Q9UN42 357 aaPredicted RBP18.07■□□□□ 0.48
KCNA4-201ENST00000328224 NEFLP07196 543 aa18.05■□□□□ 0.48
KCNA4-201ENST00000328224 HNRNPUL2Q1KMD3 747 aaKnown RBP17.97■□□□□ 0.47
KCNA4-201ENST00000328224 DIEXFQ68CQ4 756 aaKnown RBP17.97■□□□□ 0.47
KCNA4-201ENST00000328224 GTF3C3Q9Y5Q9 886 aa17.89■□□□□ 0.45
KCNA4-201ENST00000328224 ITGAEP38570 1179 aa17.87■□□□□ 0.45
KCNA4-201ENST00000328224 ACIN1Q9UKV3 1341 aaKnown RBP17.63■□□□□ 0.41
KCNA4-201ENST00000328224 CNGB1Q14028 1251 aaPredicted RBP17.62■□□□□ 0.41
KCNA4-201ENST00000328224 BCANQ96GW7 911 aa17.59■□□□□ 0.41
KCNA4-201ENST00000328224 POLR3GLQ9BT43 218 aa17.54■□□□□ 0.4
KCNA4-201ENST00000328224 ZNF316A6NFI3 1004 aaPredicted RBP17.47■□□□□ 0.39
KCNA4-201ENST00000328224 SCAF1Q9H7N4 1312 aaKnown RBP17.44■□□□□ 0.38
KCNA4-201ENST00000328224 NEUROD1Q13562 356 aa17.41■□□□□ 0.38
KCNA4-201ENST00000328224 DAXXQ9UER7 740 aaPredicted RBP17.32■□□□□ 0.36
KCNA4-201ENST00000328224 FAM50AQ14320 339 aaKnown RBP17.27■□□□□ 0.36
KCNA4-201ENST00000328224 RTL5Q5HYW3 569 aaPredicted RBP17.24■□□□□ 0.35
KCNA4-201ENST00000328224 DCAF1Q9Y4B6 1507 aa17.22■□□□□ 0.35
KCNA4-201ENST00000328224 MYO15BQ96JP2 1530 aa17.2■□□□□ 0.34
KCNA4-201ENST00000328224 ANP32CO43423 234 aa17.15■□□□□ 0.34
KCNA4-201ENST00000328224 CDK11AQ9UQ88 783 aaPredicted RBP17.13■□□□□ 0.33
KCNA4-201ENST00000328224 CSRNP3Q8WYN3 585 aa17.09■□□□□ 0.33
KCNA4-201ENST00000328224 FKBP8Q14318 412 aa17.08■□□□□ 0.32
KCNA4-201ENST00000328224 MIER1Q8N108 512 aa17.07■□□□□ 0.32
KCNA4-201ENST00000328224 TRIM52Q96A61 297 aa17.07■□□□□ 0.32
KCNA4-201ENST00000328224 PABPN1Q86U42 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
KCNA4-201ENST00000328224 CLSPNQ9HAW4 1339 aa17.02■□□□□ 0.32
KCNA4-201ENST00000328224 ZNF326Q5BKZ1 582 aaKnown RBP16.97■□□□□ 0.31
KCNA4-201ENST00000328224 DDX10Q13206 875 aaKnown RBP16.96■□□□□ 0.31
KCNA4-201ENST00000328224 P3H3Q8IVL6 736 aa16.92■□□□□ 0.3
KCNA4-201ENST00000328224 MYT1LQ9UL68 1186 aa16.92■□□□□ 0.3
KCNA4-201ENST00000328224 ABCC9O60706 1549 aa16.91■□□□□ 0.3
KCNA4-201ENST00000328224 SLC4A1APQ9BWU0 796 aaKnown RBP16.86■□□□□ 0.29
KCNA4-201ENST00000328224 HNRNPUQ00839 825 aaKnown RBP eCLIP16.85■□□□□ 0.29
KCNA4-201ENST00000328224 NPM2Q86SE8 214 aaKnown RBP16.84■□□□□ 0.29
KCNA4-201ENST00000328224 HIRIP3Q9BW71 556 aaPredicted RBP16.81■□□□□ 0.28
KCNA4-201ENST00000328224 ZCCHC6Q5VYS8 1495 aaKnown RBP16.79■□□□□ 0.28
KCNA4-201ENST00000328224 ANP32AP39687 249 aaKnown RBP16.79■□□□□ 0.28
KCNA4-201ENST00000328224 IRX6P78412 446 aaPredicted RBP16.78■□□□□ 0.28
KCNA4-201ENST00000328224 ARID3CA6NKF2 412 aa16.76■□□□□ 0.27
KCNA4-201ENST00000328224 FAM9BQ8IZU0 186 aa16.75■□□□□ 0.27
KCNA4-201ENST00000328224 NBR1Q14596 966 aa16.74■□□□□ 0.27
KCNA4-201ENST00000328224 CCDC180Q9P1Z9 1646 aa16.74■□□□□ 0.27
KCNA4-201ENST00000328224 EIF5BO60841 1220 aaKnown RBP16.7■□□□□ 0.26
KCNA4-201ENST00000328224 TONSLQ96HA7 1378 aa16.66■□□□□ 0.26
KCNA4-201ENST00000328224 SALL2Q9Y467 1007 aaPredicted RBP16.66■□□□□ 0.26
KCNA4-201ENST00000328224 BCL11AQ9H165 835 aa16.63■□□□□ 0.25
KCNA4-201ENST00000328224 ANP32EQ9BTT0 268 aa16.63■□□□□ 0.25
KCNA4-201ENST00000328224 CCDC136Q96JN2 1154 aa16.59■□□□□ 0.25
KCNA4-201ENST00000328224 SCRIBQ14160 1630 aa16.58■□□□□ 0.24
KCNA4-201ENST00000328224 SUPT16HQ9Y5B9 1047 aaKnown RBP16.55■□□□□ 0.24
KCNA4-201ENST00000328224 SENP3-EIF4A1A0A087X0R7 540 aa16.55■□□□□ 0.24
KCNA4-201ENST00000328224 MRS2Q9HD23 443 aa16.55■□□□□ 0.24
KCNA4-201ENST00000328224 ZBTB47Q9UFB7 747 aaPredicted RBP16.55■□□□□ 0.24
KCNA4-201ENST00000328224 CANXP27824 592 aaKnown RBP16.54■□□□□ 0.24
KCNA4-201ENST00000328224 CHIC2Q9UKJ5 165 aa16.53■□□□□ 0.24
KCNA4-201ENST00000328224 CEP162Q5TB80 1403 aa16.52■□□□□ 0.24
KCNA4-201ENST00000328224 ZNF777Q9ULD5 760 aaPredicted RBP16.52■□□□□ 0.23
KCNA4-201ENST00000328224 CLIP1P30622 1438 aa16.5■□□□□ 0.23
KCNA4-201ENST00000328224 RSF1Q96T23 1441 aaPredicted RBP16.48■□□□□ 0.23
KCNA4-201ENST00000328224 FBLN2P98095 1184 aa16.46■□□□□ 0.23
KCNA4-201ENST00000328224 TMC1Q8TDI8 760 aa16.46■□□□□ 0.23
KCNA4-201ENST00000328224 ARXQ96QS3 562 aa16.43■□□□□ 0.22
KCNA4-201ENST00000328224 SIN3AQ96ST3 1273 aa16.39■□□□□ 0.21
KCNA4-201ENST00000328224 EIF4G2P78344 907 aaKnown RBP eCLIP16.33■□□□□ 0.21
KCNA4-201ENST00000328224 RRP7BPQ9NSQ0 103 aa16.32■□□□□ 0.2
KCNA4-201ENST00000328224 KDM2AQ9Y2K7 1162 aa16.32■□□□□ 0.2
KCNA4-201ENST00000328224 TNIKQ9UKE5 1360 aa16.31■□□□□ 0.2
KCNA4-201ENST00000328224 RTN4Q9NQC3 1192 aaKnown RBP16.3■□□□□ 0.2
KCNA4-201ENST00000328224 RBM19Q9Y4C8 960 aaKnown RBP16.3■□□□□ 0.2
KCNA4-201ENST00000328224 B4GALNT3Q6L9W6 998 aa16.28■□□□□ 0.2
KCNA4-201ENST00000328224 GOLGA3Q08378 1498 aa16.28■□□□□ 0.2
KCNA4-201ENST00000328224 TSHZ2Q9NRE2 1034 aa16.26■□□□□ 0.19
KCNA4-201ENST00000328224 HSP90AA1P07900 732 aaKnown RBP16.25■□□□□ 0.19
KCNA4-201ENST00000328224 MTUS2Q5JR59 1369 aa16.25■□□□□ 0.19
KCNA4-201ENST00000328224 UPF2Q9HAU5 1272 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms