Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 AP000842.3-202ENST00000569238 1080 ntBASIC13.64□□□□□ -0.23
RFT1Q96AA3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 AC092135.3-201ENST00000624151 1846 ntBASIC13.64□□□□□ -0.23
RFT1Q96AA3 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.64□□□□□ -0.23
RFT1Q96AA3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RFT1Q96AA3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.63□□□□□ -0.23
RFT1Q96AA3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RFT1Q96AA3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.63□□□□□ -0.23
RFT1Q96AA3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RFT1Q96AA3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RFT1Q96AA3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RFT1Q96AA3 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.63□□□□□ -0.23
RFT1Q96AA3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.63□□□□□ -0.23
RFT1Q96AA3 AC004987.2-201ENST00000395959 1148 ntBASIC13.63□□□□□ -0.23
RFT1Q96AA3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.63□□□□□ -0.23
RFT1Q96AA3 RPS8P6-201ENST00000426177 609 ntBASIC13.63□□□□□ -0.23
RFT1Q96AA3 ADH5P3-201ENST00000433842 1137 ntBASIC13.63□□□□□ -0.23
RFT1Q96AA3 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.63□□□□□ -0.23
RFT1Q96AA3 AC079140.1-201ENST00000508039 487 ntBASIC13.63□□□□□ -0.23
RFT1Q96AA3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.63□□□□□ -0.23
RFT1Q96AA3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
RFT1Q96AA3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 AC026120.1-201ENST00000611536 926 ntBASIC13.63□□□□□ -0.23
RFT1Q96AA3 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RFT1Q96AA3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.63□□□□□ -0.23
RFT1Q96AA3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.63□□□□□ -0.23
RFT1Q96AA3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.63□□□□□ -0.23
RFT1Q96AA3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.63□□□□□ -0.23
RFT1Q96AA3 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.63□□□□□ -0.23
RFT1Q96AA3 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
RFT1Q96AA3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.63□□□□□ -0.23
RFT1Q96AA3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RFT1Q96AA3 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.63□□□□□ -0.23
RFT1Q96AA3 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.62□□□□□ -0.23
RFT1Q96AA3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFT1Q96AA3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.62□□□□□ -0.23
RFT1Q96AA3 CYP4F24P-201ENST00000586049 1580 ntBASIC13.62□□□□□ -0.23
RFT1Q96AA3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.62□□□□□ -0.23
RFT1Q96AA3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFT1Q96AA3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFT1Q96AA3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.62□□□□□ -0.23
RFT1Q96AA3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.62□□□□□ -0.23
RFT1Q96AA3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFT1Q96AA3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFT1Q96AA3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFT1Q96AA3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.62□□□□□ -0.23
RFT1Q96AA3 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFT1Q96AA3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFT1Q96AA3 WASH3P-207ENST00000560956 1394 ntBASIC13.62□□□□□ -0.23
RFT1Q96AA3 FO538757.1-201ENST00000623083 1397 ntBASIC13.62□□□□□ -0.23
RFT1Q96AA3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.62□□□□□ -0.23
RFT1Q96AA3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.62□□□□□ -0.23
RFT1Q96AA3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
RFT1Q96AA3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
RFT1Q96AA3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFT1Q96AA3 FAM220BP-201ENST00000377689 816 ntBASIC13.62□□□□□ -0.23
RFT1Q96AA3 HLA-H-201ENST00000383620 1096 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms