Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 AC073413.1-201ENST00000603927 732 ntBASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC60Q8IWA6 AC138035.3-201ENST00000622706 2791 ntBASIC16.89■□□□□ 0.3
CCDC60Q8IWA6 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC60Q8IWA6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.89■□□□□ 0.3
CCDC60Q8IWA6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 HOMER2P2-201ENST00000451621 847 ntBASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 Z93015.1-201ENST00000451718 390 ntBASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 MESTP3-201ENST00000503460 968 ntBASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 LILRP1-201ENST00000444199 1370 ntBASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC60Q8IWA6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 RN7SL713P-201ENST00000582127 302 ntBASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 EEF1DP1-201ENST00000585891 896 ntBASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 AC073347.1-201ENST00000421633 2643 ntBASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC60Q8IWA6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms