Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL10A1Q03692 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COL10A1Q03692 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
COL10A1Q03692 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL10A1Q03692 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.98□□□□□ -0.33
COL10A1Q03692 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COL10A1Q03692 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COL10A1Q03692 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL10A1Q03692 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COL10A1Q03692 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL10A1Q03692 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL10A1Q03692 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
COL10A1Q03692 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL10A1Q03692 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
COL10A1Q03692 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL10A1Q03692 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL10A1Q03692 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
COL10A1Q03692 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.97□□□□□ -0.33
COL10A1Q03692 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
COL10A1Q03692 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL10A1Q03692 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
COL10A1Q03692 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL10A1Q03692 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
COL10A1Q03692 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL10A1Q03692 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL10A1Q03692 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
COL10A1Q03692 AGAP7P-201ENST00000582299 2062 ntBASIC12.97□□□□□ -0.33
COL10A1Q03692 AGAP14-201ENST00000624701 2060 ntBASIC12.97□□□□□ -0.33
COL10A1Q03692 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
COL10A1Q03692 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL10A1Q03692 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL10A1Q03692 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL10A1Q03692 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
COL10A1Q03692 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.97□□□□□ -0.33
COL10A1Q03692 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
COL10A1Q03692 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.97□□□□□ -0.33
COL10A1Q03692 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.97□□□□□ -0.33
COL10A1Q03692 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.97□□□□□ -0.33
COL10A1Q03692 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.97□□□□□ -0.33
COL10A1Q03692 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.97□□□□□ -0.33
COL10A1Q03692 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.97□□□□□ -0.33
COL10A1Q03692 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
COL10A1Q03692 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.97□□□□□ -0.33
COL10A1Q03692 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.97□□□□□ -0.33
COL10A1Q03692 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.97□□□□□ -0.33
COL10A1Q03692 AC000095.1-201ENST00000603208 874 ntBASIC12.97□□□□□ -0.33
COL10A1Q03692 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.97□□□□□ -0.33
COL10A1Q03692 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.97□□□□□ -0.33
COL10A1Q03692 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.97□□□□□ -0.33
COL10A1Q03692 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.97□□□□□ -0.33
COL10A1Q03692 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
COL10A1Q03692 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL10A1Q03692 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.97□□□□□ -0.33
COL10A1Q03692 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
COL10A1Q03692 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.97□□□□□ -0.33
COL10A1Q03692 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.97□□□□□ -0.33
COL10A1Q03692 AC106881.1-201ENST00000605849 3329 ntBASIC12.97□□□□□ -0.33
COL10A1Q03692 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
COL10A1Q03692 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.97□□□□□ -0.33
COL10A1Q03692 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
COL10A1Q03692 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL10A1Q03692 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL10A1Q03692 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL10A1Q03692 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL10A1Q03692 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL10A1Q03692 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
COL10A1Q03692 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
COL10A1Q03692 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.96□□□□□ -0.33
COL10A1Q03692 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL10A1Q03692 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
COL10A1Q03692 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL10A1Q03692 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL10A1Q03692 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
COL10A1Q03692 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
COL10A1Q03692 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL10A1Q03692 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL10A1Q03692 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL10A1Q03692 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL10A1Q03692 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL10A1Q03692 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL10A1Q03692 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL10A1Q03692 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
COL10A1Q03692 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
COL10A1Q03692 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL10A1Q03692 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL10A1Q03692 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
COL10A1Q03692 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.96□□□□□ -0.33
COL10A1Q03692 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL10A1Q03692 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL10A1Q03692 MIR770-201ENST00000390219 98 ntBASIC12.96□□□□□ -0.33
COL10A1Q03692 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL10A1Q03692 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
COL10A1Q03692 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.96□□□□□ -0.33
COL10A1Q03692 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.96□□□□□ -0.33
COL10A1Q03692 DOC2GP-202ENST00000514950 1163 ntBASIC12.96□□□□□ -0.33
COL10A1Q03692 TPRX2P-201ENST00000535362 881 ntBASIC12.96□□□□□ -0.33
COL10A1Q03692 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.96□□□□□ -0.33
COL10A1Q03692 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
COL10A1Q03692 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.96□□□□□ -0.33
COL10A1Q03692 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms