Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SMIM11AP58511 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SMIM11AP58511 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SMIM11AP58511 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.14□□□□□ -0.15
SMIM11AP58511 AL627223.1-201ENST00000416693 442 ntBASIC14.14□□□□□ -0.15
SMIM11AP58511 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.14□□□□□ -0.15
SMIM11AP58511 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SMIM11AP58511 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.14□□□□□ -0.15
SMIM11AP58511 AC005829.1-201ENST00000570002 483 ntBASIC14.14□□□□□ -0.15
SMIM11AP58511 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.14□□□□□ -0.15
SMIM11AP58511 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
SMIM11AP58511 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.14□□□□□ -0.15
SMIM11AP58511 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.14□□□□□ -0.15
SMIM11AP58511 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.14□□□□□ -0.15
SMIM11AP58511 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.14□□□□□ -0.15
SMIM11AP58511 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SMIM11AP58511 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
SMIM11AP58511 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.14□□□□□ -0.15
SMIM11AP58511 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SMIM11AP58511 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 MTHFR-210ENST00000641407 2387 ntBASIC14.14□□□□□ -0.15
SMIM11AP58511 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMIM11AP58511 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.13□□□□□ -0.15
SMIM11AP58511 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.13□□□□□ -0.15
SMIM11AP58511 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 CETN4P-206ENST00000642099 2168 ntBASIC14.13□□□□□ -0.15
SMIM11AP58511 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
SMIM11AP58511 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 AC074338.1-201ENST00000416825 156 ntBASIC14.13□□□□□ -0.15
SMIM11AP58511 FAM58DP-201ENST00000428076 619 ntBASIC14.13□□□□□ -0.15
SMIM11AP58511 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.13□□□□□ -0.15
SMIM11AP58511 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.13□□□□□ -0.15
SMIM11AP58511 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.13□□□□□ -0.15
SMIM11AP58511 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.13□□□□□ -0.15
SMIM11AP58511 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.13□□□□□ -0.15
SMIM11AP58511 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.13□□□□□ -0.15
SMIM11AP58511 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.13□□□□□ -0.15
SMIM11AP58511 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.13□□□□□ -0.15
SMIM11AP58511 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.13□□□□□ -0.15
SMIM11AP58511 AL589739.1-201ENST00000607720 493 ntBASIC14.13□□□□□ -0.15
SMIM11AP58511 AL513210.1-201ENST00000629608 234 ntBASIC14.13□□□□□ -0.15
SMIM11AP58511 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.13□□□□□ -0.15
SMIM11AP58511 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SMIM11AP58511 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SMIM11AP58511 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.13□□□□□ -0.15
SMIM11AP58511 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
SMIM11AP58511 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SMIM11AP58511 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.13□□□□□ -0.15
SMIM11AP58511 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
SMIM11AP58511 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.13□□□□□ -0.15
SMIM11AP58511 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SMIM11AP58511 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM11AP58511 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM11AP58511 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.12□□□□□ -0.15
SMIM11AP58511 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms