Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.08□□□□□ -0.16
CLDN20P56880 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CLDN20P56880 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN20P56880 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CLDN20P56880 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN20P56880 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN20P56880 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN20P56880 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CLDN20P56880 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN20P56880 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CLDN20P56880 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN20P56880 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN20P56880 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN20P56880 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN20P56880 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CLDN20P56880 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CLDN20P56880 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN20P56880 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 AC091951.1-201ENST00000512854 2465 ntBASIC14.07□□□□□ -0.16
CLDN20P56880 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CLDN20P56880 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 AC009090.5-201ENST00000624886 2285 ntBASIC14.07□□□□□ -0.16
CLDN20P56880 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN20P56880 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN20P56880 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
CLDN20P56880 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
CLDN20P56880 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CLDN20P56880 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN20P56880 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 AC127383.1-201ENST00000444697 1800 ntBASIC14.07□□□□□ -0.16
CLDN20P56880 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CLDN20P56880 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN20P56880 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.07□□□□□ -0.16
CLDN20P56880 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN20P56880 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN20P56880 AC104596.2-201ENST00000512793 793 ntBASIC14.07□□□□□ -0.16
CLDN20P56880 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN20P56880 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN20P56880 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CLDN20P56880 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CLDN20P56880 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.07□□□□□ -0.16
CLDN20P56880 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN20P56880 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN20P56880 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN20P56880 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CLDN20P56880 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN20P56880 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN20P56880 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CLDN20P56880 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 AC005252.3-201ENST00000623855 2258 ntBASIC14.07□□□□□ -0.16
CLDN20P56880 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CLDN20P56880 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN20P56880 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN20P56880 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.06□□□□□ -0.16
CLDN20P56880 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CLDN20P56880 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.06□□□□□ -0.16
CLDN20P56880 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CLDN20P56880 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CLDN20P56880 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CLDN20P56880 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.06□□□□□ -0.16
CLDN20P56880 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN20P56880 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.06□□□□□ -0.16
CLDN20P56880 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN20P56880 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms