Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KDM5CP41229 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
KDM5CP41229 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KDM5CP41229 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KDM5CP41229 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KDM5CP41229 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KDM5CP41229 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
KDM5CP41229 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KDM5CP41229 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC22.29■■□□□ 1.16
KDM5CP41229 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
KDM5CP41229 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC22.29■■□□□ 1.16
KDM5CP41229 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
KDM5CP41229 KRT18P9-201ENST00000604826 1300 ntBASIC22.29■■□□□ 1.16
KDM5CP41229 AC092299.1-201ENST00000632679 757 ntBASIC22.29■■□□□ 1.16
KDM5CP41229 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
KDM5CP41229 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KDM5CP41229 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC22.29■■□□□ 1.16
KDM5CP41229 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KDM5CP41229 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KDM5CP41229 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
KDM5CP41229 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC22.29■■□□□ 1.16
KDM5CP41229 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
KDM5CP41229 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KDM5CP41229 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KDM5CP41229 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
KDM5CP41229 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC22.29■■□□□ 1.16
KDM5CP41229 PTPA-215ENST00000432124 567 ntTSL 4 BASIC22.29■■□□□ 1.16
KDM5CP41229 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC22.29■■□□□ 1.16
KDM5CP41229 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KDM5CP41229 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KDM5CP41229 AC009145.4-201ENST00000625119 1294 ntBASIC22.29■■□□□ 1.16
KDM5CP41229 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KDM5CP41229 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC22.29■■□□□ 1.16
KDM5CP41229 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KDM5CP41229 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC22.28■■□□□ 1.16
KDM5CP41229 AL590440.2-201ENST00000641973 1595 ntBASIC22.28■■□□□ 1.16
KDM5CP41229 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KDM5CP41229 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC22.28■■□□□ 1.16
KDM5CP41229 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KDM5CP41229 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KDM5CP41229 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
KDM5CP41229 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KDM5CP41229 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
KDM5CP41229 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC22.28■■□□□ 1.16
KDM5CP41229 HIST2H2BA-201ENST00000412169 381 ntBASIC22.28■■□□□ 1.16
KDM5CP41229 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC22.28■■□□□ 1.16
KDM5CP41229 AL807761.2-201ENST00000422849 729 ntBASIC22.28■■□□□ 1.16
KDM5CP41229 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KDM5CP41229 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC22.28■■□□□ 1.16
KDM5CP41229 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC22.28■■□□□ 1.16
KDM5CP41229 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC22.28■■□□□ 1.16
KDM5CP41229 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC22.28■■□□□ 1.16
KDM5CP41229 SIGLEC18P-201ENST00000602271 909 ntBASIC22.28■■□□□ 1.16
KDM5CP41229 AC087392.5-201ENST00000612517 489 ntBASIC22.28■■□□□ 1.16
KDM5CP41229 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
KDM5CP41229 AC138466.5-201ENST00000624002 808 ntBASIC22.28■■□□□ 1.16
KDM5CP41229 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KDM5CP41229 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
KDM5CP41229 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
KDM5CP41229 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KDM5CP41229 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC22.27■■□□□ 1.16
KDM5CP41229 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KDM5CP41229 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC22.27■■□□□ 1.16
KDM5CP41229 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
KDM5CP41229 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KDM5CP41229 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC22.27■■□□□ 1.16
KDM5CP41229 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
KDM5CP41229 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KDM5CP41229 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KDM5CP41229 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC22.27■■□□□ 1.16
KDM5CP41229 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC22.27■■□□□ 1.16
KDM5CP41229 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC22.27■■□□□ 1.16
KDM5CP41229 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC22.27■■□□□ 1.16
KDM5CP41229 AC009560.1-201ENST00000620208 434 ntBASIC22.27■■□□□ 1.16
KDM5CP41229 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KDM5CP41229 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
KDM5CP41229 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KDM5CP41229 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KDM5CP41229 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
KDM5CP41229 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC22.27■■□□□ 1.16
KDM5CP41229 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
KDM5CP41229 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KDM5CP41229 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC22.27■■□□□ 1.16
KDM5CP41229 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC22.27■■□□□ 1.15
KDM5CP41229 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
KDM5CP41229 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
KDM5CP41229 LINC01815-202ENST00000641468 1409 ntBASIC22.27■■□□□ 1.15
KDM5CP41229 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC22.26■■□□□ 1.15
KDM5CP41229 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
KDM5CP41229 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
KDM5CP41229 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KDM5CP41229 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
KDM5CP41229 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
KDM5CP41229 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
KDM5CP41229 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC22.26■■□□□ 1.15
KDM5CP41229 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC22.26■■□□□ 1.15
KDM5CP41229 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KDM5CP41229 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KDM5CP41229 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KDM5CP41229 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms