Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN6P29350 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN6P29350 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN6P29350 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PTPN6P29350 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.53□□□□□ -0.08
PTPN6P29350 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.53□□□□□ -0.08
PTPN6P29350 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.53□□□□□ -0.08
PTPN6P29350 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
PTPN6P29350 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN6P29350 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN6P29350 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN6P29350 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.53□□□□□ -0.08
PTPN6P29350 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.53□□□□□ -0.08
PTPN6P29350 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PTPN6P29350 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN6P29350 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.53□□□□□ -0.08
PTPN6P29350 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN6P29350 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN6P29350 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN6P29350 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PTPN6P29350 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN6P29350 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN6P29350 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.53□□□□□ -0.08
PTPN6P29350 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN6P29350 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PTPN6P29350 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PTPN6P29350 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.53□□□□□ -0.08
PTPN6P29350 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.53□□□□□ -0.08
PTPN6P29350 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.53□□□□□ -0.08
PTPN6P29350 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.53□□□□□ -0.08
PTPN6P29350 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.53□□□□□ -0.08
PTPN6P29350 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN6P29350 LINC02560-201ENST00000596379 459 ntBASIC14.53□□□□□ -0.08
PTPN6P29350 AC009118.2-201ENST00000613275 655 ntBASIC14.53□□□□□ -0.08
PTPN6P29350 AC008761.3-201ENST00000624803 892 ntBASIC14.53□□□□□ -0.08
PTPN6P29350 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.53□□□□□ -0.08
PTPN6P29350 AC004840.1-201ENST00000636359 365 ntBASIC14.53□□□□□ -0.08
PTPN6P29350 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
PTPN6P29350 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN6P29350 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PTPN6P29350 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN6P29350 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN6P29350 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN6P29350 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PTPN6P29350 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.53□□□□□ -0.08
PTPN6P29350 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.53□□□□□ -0.08
PTPN6P29350 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN6P29350 AP001267.2-201ENST00000532619 2086 ntBASIC14.53□□□□□ -0.08
PTPN6P29350 AC113367.3-201ENST00000508316 1912 ntBASIC14.53□□□□□ -0.08
PTPN6P29350 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.52□□□□□ -0.08
PTPN6P29350 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.52□□□□□ -0.08
PTPN6P29350 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTPN6P29350 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
PTPN6P29350 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTPN6P29350 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTPN6P29350 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTPN6P29350 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTPN6P29350 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTPN6P29350 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PTPN6P29350 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PTPN6P29350 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTPN6P29350 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTPN6P29350 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.52□□□□□ -0.08
PTPN6P29350 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.52□□□□□ -0.08
PTPN6P29350 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTPN6P29350 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.52□□□□□ -0.09
PTPN6P29350 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
PTPN6P29350 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PTPN6P29350 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.52□□□□□ -0.09
PTPN6P29350 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.52□□□□□ -0.09
PTPN6P29350 KRT18P43-201ENST00000469825 1281 ntBASIC14.52□□□□□ -0.09
PTPN6P29350 SERBP1P5-201ENST00000510079 1181 ntBASIC14.52□□□□□ -0.09
PTPN6P29350 SDHAP3-202ENST00000515467 728 ntBASIC14.52□□□□□ -0.09
PTPN6P29350 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PTPN6P29350 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PTPN6P29350 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PTPN6P29350 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.52□□□□□ -0.09
PTPN6P29350 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.52□□□□□ -0.09
PTPN6P29350 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.52□□□□□ -0.09
PTPN6P29350 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.52□□□□□ -0.09
PTPN6P29350 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PTPN6P29350 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
PTPN6P29350 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.52□□□□□ -0.09
PTPN6P29350 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTPN6P29350 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PTPN6P29350 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.52□□□□□ -0.09
PTPN6P29350 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTPN6P29350 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTPN6P29350 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTPN6P29350 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTPN6P29350 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN6P29350 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.51□□□□□ -0.09
PTPN6P29350 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN6P29350 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN6P29350 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN6P29350 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN6P29350 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PTPN6P29350 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.51□□□□□ -0.09
PTPN6P29350 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms