Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.51□□□□□ -0.09
MT-ND1P03886 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
MT-ND1P03886 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.51□□□□□ -0.09
MT-ND1P03886 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 YBX2P1-201ENST00000394192 760 ntBASIC14.51□□□□□ -0.09
MT-ND1P03886 MIR940-201ENST00000401276 94 ntBASIC14.51□□□□□ -0.09
MT-ND1P03886 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.51□□□□□ -0.09
MT-ND1P03886 AL139010.1-201ENST00000454878 894 ntBASIC14.51□□□□□ -0.09
MT-ND1P03886 KRT8P48-201ENST00000515599 1220 ntBASIC14.51□□□□□ -0.09
MT-ND1P03886 KRT18P58-201ENST00000527480 1120 ntBASIC14.51□□□□□ -0.09
MT-ND1P03886 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.51□□□□□ -0.09
MT-ND1P03886 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.51□□□□□ -0.09
MT-ND1P03886 C20orf181-201ENST00000623918 480 ntBASIC14.51□□□□□ -0.09
MT-ND1P03886 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
MT-ND1P03886 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
MT-ND1P03886 AC067750.1-201ENST00000608826 6545 ntBASIC14.51□□□□□ -0.09
MT-ND1P03886 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
MT-ND1P03886 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
MT-ND1P03886 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
MT-ND1P03886 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.5□□□□□ -0.09
MT-ND1P03886 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.5□□□□□ -0.09
MT-ND1P03886 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
MT-ND1P03886 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MT-ND1P03886 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
MT-ND1P03886 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MT-ND1P03886 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.5□□□□□ -0.09
MT-ND1P03886 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MT-ND1P03886 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.5□□□□□ -0.09
MT-ND1P03886 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MT-ND1P03886 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.5□□□□□ -0.09
MT-ND1P03886 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.5□□□□□ -0.09
MT-ND1P03886 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MT-ND1P03886 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MT-ND1P03886 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
MT-ND1P03886 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
MT-ND1P03886 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
MT-ND1P03886 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MT-ND1P03886 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MT-ND1P03886 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MT-ND1P03886 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.5□□□□□ -0.09
MT-ND1P03886 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
MT-ND1P03886 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MT-ND1P03886 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MT-ND1P03886 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.5□□□□□ -0.09
MT-ND1P03886 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MT-ND1P03886 AC004832.2-201ENST00000426397 482 ntBASIC14.5□□□□□ -0.09
MT-ND1P03886 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MT-ND1P03886 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.5□□□□□ -0.09
MT-ND1P03886 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.5□□□□□ -0.09
MT-ND1P03886 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.5□□□□□ -0.09
MT-ND1P03886 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.5□□□□□ -0.09
MT-ND1P03886 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.5□□□□□ -0.09
MT-ND1P03886 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MT-ND1P03886 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MT-ND1P03886 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
MT-ND1P03886 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MT-ND1P03886 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
MT-ND1P03886 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MT-ND1P03886 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.5□□□□□ -0.09
MT-ND1P03886 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
MT-ND1P03886 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
MT-ND1P03886 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
MT-ND1P03886 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
MT-ND1P03886 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.5□□□□□ -0.09
MT-ND1P03886 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
MT-ND1P03886 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.49□□□□□ -0.09
MT-ND1P03886 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MT-ND1P03886 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MT-ND1P03886 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MT-ND1P03886 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
MT-ND1P03886 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
MT-ND1P03886 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MT-ND1P03886 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
MT-ND1P03886 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
MT-ND1P03886 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.49□□□□□ -0.09
MT-ND1P03886 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.49□□□□□ -0.09
MT-ND1P03886 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.49□□□□□ -0.09
MT-ND1P03886 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
MT-ND1P03886 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MT-ND1P03886 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.49□□□□□ -0.09
MT-ND1P03886 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.49□□□□□ -0.09
MT-ND1P03886 RPL5P21-201ENST00000404620 815 ntBASIC14.49□□□□□ -0.09
MT-ND1P03886 AC136604.1-201ENST00000418535 575 ntBASIC14.49□□□□□ -0.09
MT-ND1P03886 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.49□□□□□ -0.09
MT-ND1P03886 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms