Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.09□□□□□ -0.15
NKX2-2O95096 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.09□□□□□ -0.15
NKX2-2O95096 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NKX2-2O95096 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
NKX2-2O95096 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NKX2-2O95096 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.08□□□□□ -0.16
NKX2-2O95096 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.08□□□□□ -0.16
NKX2-2O95096 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.08□□□□□ -0.16
NKX2-2O95096 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.08□□□□□ -0.16
NKX2-2O95096 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
NKX2-2O95096 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NKX2-2O95096 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.08□□□□□ -0.16
NKX2-2O95096 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.08□□□□□ -0.16
NKX2-2O95096 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.08□□□□□ -0.16
NKX2-2O95096 KLF2P2-201ENST00000416807 1039 ntBASIC14.08□□□□□ -0.16
NKX2-2O95096 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.08□□□□□ -0.16
NKX2-2O95096 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.08□□□□□ -0.16
NKX2-2O95096 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.08□□□□□ -0.16
NKX2-2O95096 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.08□□□□□ -0.16
NKX2-2O95096 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 CU634019.7-201ENST00000624153 1185 ntBASIC14.08□□□□□ -0.16
NKX2-2O95096 FP236241.2-201ENST00000624906 1185 ntBASIC14.08□□□□□ -0.16
NKX2-2O95096 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 AL603764.1-201ENST00000636452 321 ntBASIC14.08□□□□□ -0.16
NKX2-2O95096 AL033527.5-201ENST00000641382 801 ntBASIC14.08□□□□□ -0.16
NKX2-2O95096 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
NKX2-2O95096 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
NKX2-2O95096 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NKX2-2O95096 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.08□□□□□ -0.16
NKX2-2O95096 LINC02228-204ENST00000642115 2962 ntBASIC14.08□□□□□ -0.16
NKX2-2O95096 AL390755.1-201ENST00000623716 2027 ntBASIC14.08□□□□□ -0.16
NKX2-2O95096 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.08□□□□□ -0.16
NKX2-2O95096 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.08□□□□□ -0.16
NKX2-2O95096 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NKX2-2O95096 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
NKX2-2O95096 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.07□□□□□ -0.16
NKX2-2O95096 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.07□□□□□ -0.16
NKX2-2O95096 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.07□□□□□ -0.16
NKX2-2O95096 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.07□□□□□ -0.16
NKX2-2O95096 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NKX2-2O95096 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.07□□□□□ -0.16
NKX2-2O95096 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.07□□□□□ -0.16
NKX2-2O95096 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.07□□□□□ -0.16
NKX2-2O95096 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.07□□□□□ -0.16
NKX2-2O95096 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.07□□□□□ -0.16
NKX2-2O95096 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 AC022616.1-201ENST00000518688 554 ntBASIC14.07□□□□□ -0.16
NKX2-2O95096 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.07□□□□□ -0.16
NKX2-2O95096 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.07□□□□□ -0.16
NKX2-2O95096 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NKX2-2O95096 CICP14-201ENST00000629111 2732 ntBASIC14.07□□□□□ -0.16
NKX2-2O95096 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.07□□□□□ -0.16
NKX2-2O95096 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.07□□□□□ -0.16
NKX2-2O95096 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms