Protein–RNA interactions for Protein: O75962

TRIO, Triple functional domain protein, humanhuman

Predictions only

Length 3,097 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOO75962 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
TRIOO75962 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIOO75962 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.14■□□□□ 0.01
TRIOO75962 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIOO75962 CHCHD2P9-201ENST00000461726 456 ntBASIC15.14■□□□□ 0.01
TRIOO75962 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRIOO75962 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC15.14■□□□□ 0.01
TRIOO75962 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.14■□□□□ 0.01
TRIOO75962 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIOO75962 AL138725.1-201ENST00000407347 1314 ntBASIC15.14■□□□□ 0.01
TRIOO75962 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIOO75962 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIOO75962 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIOO75962 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRIOO75962 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
TRIOO75962 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRIOO75962 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.14■□□□□ 0.01
TRIOO75962 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.14■□□□□ 0.01
TRIOO75962 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIOO75962 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIOO75962 AC105250.1-201ENST00000509378 2057 ntBASIC15.14■□□□□ 0.01
TRIOO75962 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIOO75962 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIOO75962 HNRNPA1P58-201ENST00000403629 610 ntBASIC15.14■□□□□ 0.01
TRIOO75962 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIOO75962 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIOO75962 AC026434.2-201ENST00000506094 1078 ntBASIC15.14■□□□□ 0.01
TRIOO75962 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.14■□□□□ 0.01
TRIOO75962 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.14■□□□□ 0.01
TRIOO75962 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC15.14■□□□□ 0.01
TRIOO75962 AC140113.1-201ENST00000603467 169 ntBASIC15.14■□□□□ 0.01
TRIOO75962 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIOO75962 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIOO75962 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIOO75962 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIOO75962 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
TRIOO75962 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIOO75962 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIOO75962 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIOO75962 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIOO75962 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC15.13■□□□□ 0.01
TRIOO75962 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIOO75962 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIOO75962 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIOO75962 AC018629.1-201ENST00000623381 1736 ntBASIC15.13■□□□□ 0.01
TRIOO75962 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIOO75962 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIOO75962 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIOO75962 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIOO75962 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIOO75962 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIOO75962 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIOO75962 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIOO75962 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIOO75962 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TRIOO75962 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRIOO75962 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
TRIOO75962 RN7SL470P-201ENST00000583069 259 ntBASIC15.13■□□□□ 0.01
TRIOO75962 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIOO75962 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRIOO75962 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIOO75962 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIOO75962 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIOO75962 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
TRIOO75962 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIOO75962 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIOO75962 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC15.13■□□□□ 0.01
TRIOO75962 RN7SL81P-201ENST00000493781 261 ntBASIC15.13■□□□□ 0.01
TRIOO75962 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC15.13■□□□□ 0.01
TRIOO75962 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRIOO75962 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC15.13■□□□□ 0.01
TRIOO75962 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15.13■□□□□ 0.01
TRIOO75962 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
TRIOO75962 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIOO75962 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIOO75962 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIOO75962 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.12■□□□□ 0.01
TRIOO75962 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIOO75962 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.12■□□□□ 0.01
TRIOO75962 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TRIOO75962 AC112504.1-201ENST00000623415 1841 ntBASIC15.12■□□□□ 0.01
TRIOO75962 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRIOO75962 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIOO75962 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.12■□□□□ 0.01
TRIOO75962 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIOO75962 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIOO75962 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIOO75962 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIOO75962 Z69890.1-201ENST00000382990 339 ntBASIC15.12■□□□□ 0.01
TRIOO75962 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.12■□□□□ 0.01
TRIOO75962 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.12■□□□□ 0.01
TRIOO75962 AC004554.1-201ENST00000422830 1468 ntBASIC15.12■□□□□ 0.01
TRIOO75962 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIOO75962 AC090616.6-203ENST00000579186 1945 ntBASIC15.12■□□□□ 0.01
TRIOO75962 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIOO75962 AL513523.2-202ENST00000427283 2040 ntBASIC15.12■□□□□ 0.01
TRIOO75962 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIOO75962 AC006504.5-208ENST00000588784 2401 ntBASIC15.12■□□□□ 0.01
TRIOO75962 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIOO75962 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms