Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.34□□□□□ -0.27
UPK1BO75841 AL805961.1-202ENST00000641562 540 ntBASIC13.34□□□□□ -0.27
UPK1BO75841 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK1BO75841 AL365181.3-201ENST00000605886 3222 ntBASIC13.34□□□□□ -0.27
UPK1BO75841 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
UPK1BO75841 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.34□□□□□ -0.27
UPK1BO75841 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.34□□□□□ -0.27
UPK1BO75841 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK1BO75841 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UPK1BO75841 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
UPK1BO75841 AC012508.2-201ENST00000567613 1472 ntBASIC13.34□□□□□ -0.27
UPK1BO75841 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK1BO75841 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK1BO75841 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK1BO75841 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.34□□□□□ -0.27
UPK1BO75841 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK1BO75841 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK1BO75841 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UPK1BO75841 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
UPK1BO75841 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK1BO75841 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UPK1BO75841 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UPK1BO75841 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.33□□□□□ -0.27
UPK1BO75841 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
UPK1BO75841 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
UPK1BO75841 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
UPK1BO75841 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
UPK1BO75841 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
UPK1BO75841 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
UPK1BO75841 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.33□□□□□ -0.28
UPK1BO75841 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.33□□□□□ -0.28
UPK1BO75841 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 AC012617.1-204ENST00000586340 2305 ntBASIC13.33□□□□□ -0.28
UPK1BO75841 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.33□□□□□ -0.28
UPK1BO75841 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 AC004987.2-201ENST00000395959 1148 ntBASIC13.33□□□□□ -0.28
UPK1BO75841 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 HLA-L-209ENST00000420110 1011 ntBASIC13.33□□□□□ -0.28
UPK1BO75841 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.33□□□□□ -0.28
UPK1BO75841 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.33□□□□□ -0.28
UPK1BO75841 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.33□□□□□ -0.28
UPK1BO75841 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.33□□□□□ -0.28
UPK1BO75841 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
UPK1BO75841 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
UPK1BO75841 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.33□□□□□ -0.28
UPK1BO75841 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
UPK1BO75841 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.33□□□□□ -0.28
UPK1BO75841 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.33□□□□□ -0.28
UPK1BO75841 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
UPK1BO75841 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 AC020910.6-201ENST00000623084 1459 ntBASIC13.33□□□□□ -0.28
UPK1BO75841 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.33□□□□□ -0.28
UPK1BO75841 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.33□□□□□ -0.28
UPK1BO75841 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
UPK1BO75841 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
UPK1BO75841 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.33□□□□□ -0.28
UPK1BO75841 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.33□□□□□ -0.28
UPK1BO75841 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.33□□□□□ -0.28
UPK1BO75841 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UPK1BO75841 AL731571.1-201ENST00000617058 5428 ntBASIC13.33□□□□□ -0.28
UPK1BO75841 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.33□□□□□ -0.28
UPK1BO75841 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.33□□□□□ -0.28
UPK1BO75841 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
UPK1BO75841 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.32□□□□□ -0.28
UPK1BO75841 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 AC106818.1-201ENST00000623223 3242 ntBASIC13.32□□□□□ -0.28
UPK1BO75841 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.32□□□□□ -0.28
UPK1BO75841 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.32□□□□□ -0.28
UPK1BO75841 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms