Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.93■□□□□ 0.14
CCDC188H7C350 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.93■□□□□ 0.14
CCDC188H7C350 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.93■□□□□ 0.14
CCDC188H7C350 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.93■□□□□ 0.14
CCDC188H7C350 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.93■□□□□ 0.14
CCDC188H7C350 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CCDC188H7C350 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CCDC188H7C350 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 AC023274.1-201ENST00000418278 595 ntBASIC15.93■□□□□ 0.14
CCDC188H7C350 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.93■□□□□ 0.14
CCDC188H7C350 MKNK2P1-201ENST00000437526 628 ntBASIC15.93■□□□□ 0.14
CCDC188H7C350 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.93■□□□□ 0.14
CCDC188H7C350 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.93■□□□□ 0.14
CCDC188H7C350 KRT18P43-201ENST00000469825 1281 ntBASIC15.93■□□□□ 0.14
CCDC188H7C350 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.93■□□□□ 0.14
CCDC188H7C350 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.93■□□□□ 0.14
CCDC188H7C350 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
CCDC188H7C350 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 AC003101.2-201ENST00000612557 442 ntBASIC15.93■□□□□ 0.14
CCDC188H7C350 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 C20orf181-201ENST00000623918 480 ntBASIC15.93■□□□□ 0.14
CCDC188H7C350 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.93■□□□□ 0.14
CCDC188H7C350 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.93■□□□□ 0.14
CCDC188H7C350 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.93■□□□□ 0.14
CCDC188H7C350 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CCDC188H7C350 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
CCDC188H7C350 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
CCDC188H7C350 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.93■□□□□ 0.14
CCDC188H7C350 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
CCDC188H7C350 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC188H7C350 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC188H7C350 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC188H7C350 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC188H7C350 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC188H7C350 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC188H7C350 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CCDC188H7C350 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC188H7C350 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC188H7C350 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC188H7C350 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC188H7C350 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC188H7C350 MBLAC2-202ENST00000514906 1936 ntBASIC15.92■□□□□ 0.14
CCDC188H7C350 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC188H7C350 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC188H7C350 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC188H7C350 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC188H7C350 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC188H7C350 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC188H7C350 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC188H7C350 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CCDC188H7C350 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC188H7C350 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC188H7C350 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CCDC188H7C350 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC188H7C350 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CCDC188H7C350 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.92■□□□□ 0.14
CCDC188H7C350 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC188H7C350 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC188H7C350 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC188H7C350 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC188H7C350 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.92■□□□□ 0.14
CCDC188H7C350 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC188H7C350 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC188H7C350 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC188H7C350 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC188H7C350 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC188H7C350 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC188H7C350 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC188H7C350 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC188H7C350 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CCDC188H7C350 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CCDC188H7C350 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC188H7C350 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC188H7C350 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC188H7C350 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CCDC188H7C350 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC188H7C350 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC188H7C350 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC188H7C350 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms