Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
NACAE9PAV3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NACAE9PAV3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
NACAE9PAV3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NACAE9PAV3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NACAE9PAV3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC11.31□□□□□ -0.6
NACAE9PAV3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NACAE9PAV3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC11.3□□□□□ -0.6
NACAE9PAV3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC11.3□□□□□ -0.6
NACAE9PAV3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
NACAE9PAV3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.3□□□□□ -0.6
NACAE9PAV3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
NACAE9PAV3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
NACAE9PAV3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC11.3□□□□□ -0.6
NACAE9PAV3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
NACAE9PAV3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
NACAE9PAV3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
NACAE9PAV3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.3□□□□□ -0.6
NACAE9PAV3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC11.3□□□□□ -0.6
NACAE9PAV3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
NACAE9PAV3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC11.3□□□□□ -0.6
NACAE9PAV3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC11.3□□□□□ -0.6
NACAE9PAV3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC11.3□□□□□ -0.6
NACAE9PAV3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC11.3□□□□□ -0.6
NACAE9PAV3 IGHV3-62-201ENST00000520057 340 ntBASIC11.3□□□□□ -0.6
NACAE9PAV3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
NACAE9PAV3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC11.3□□□□□ -0.6
NACAE9PAV3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC11.3□□□□□ -0.6
NACAE9PAV3 LINC02560-201ENST00000596379 459 ntBASIC11.3□□□□□ -0.6
NACAE9PAV3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC11.3□□□□□ -0.6
NACAE9PAV3 AL133215.2-201ENST00000609242 977 ntBASIC11.3□□□□□ -0.6
NACAE9PAV3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC11.3□□□□□ -0.6
NACAE9PAV3 AC073592.8-201ENST00000624126 511 ntBASIC11.3□□□□□ -0.6
NACAE9PAV3 AC004840.1-201ENST00000636359 365 ntBASIC11.3□□□□□ -0.6
NACAE9PAV3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
NACAE9PAV3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.3□□□□□ -0.6
NACAE9PAV3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
NACAE9PAV3 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC11.3□□□□□ -0.6
NACAE9PAV3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
NACAE9PAV3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
NACAE9PAV3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
NACAE9PAV3 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NACAE9PAV3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC11.3□□□□□ -0.6
NACAE9PAV3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.29□□□□□ -0.6
NACAE9PAV3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC11.29□□□□□ -0.6
NACAE9PAV3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
NACAE9PAV3 AC004987.2-201ENST00000395959 1148 ntBASIC11.29□□□□□ -0.6
NACAE9PAV3 AC136604.1-201ENST00000418535 575 ntBASIC11.29□□□□□ -0.6
NACAE9PAV3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC11.29□□□□□ -0.6
NACAE9PAV3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC11.29□□□□□ -0.6
NACAE9PAV3 AL139010.1-201ENST00000454878 894 ntBASIC11.29□□□□□ -0.6
NACAE9PAV3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
NACAE9PAV3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC11.29□□□□□ -0.6
NACAE9PAV3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC11.29□□□□□ -0.6
NACAE9PAV3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC11.29□□□□□ -0.6
NACAE9PAV3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
NACAE9PAV3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NACAE9PAV3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC11.29□□□□□ -0.6
NACAE9PAV3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms