Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PRAMEF25A6NGN4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 MTHFR-210ENST00000641407 2387 ntBASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 AC087499.6-201ENST00000411576 835 ntBASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 RARRES2P5-201ENST00000564013 466 ntBASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 AL121723.1-201ENST00000445194 1519 ntBASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PRAMEF25A6NGN4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 AL391825.1-201ENST00000457671 1364 ntBASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 AL353779.1-201ENST00000434793 351 ntBASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 RRP7BP-205ENST00000566851 833 ntBASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 AC015910.1-201ENST00000579400 975 ntBASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 AC099568.2-201ENST00000609194 695 ntBASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 AC097359.2-201ENST00000604992 2389 ntBASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms