Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 FGD5P1-202ENST00000614866 2498 ntBASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 AC007686.3-201ENST00000619017 3487 ntBASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 AC022144.1-201ENST00000602255 1580 ntBASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PCDHGA11Q9Y5H2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 MTATP6P19-201ENST00000413797 659 ntBASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 BASP1P1-201ENST00000430708 665 ntBASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 AC004890.2-204ENST00000481968 304 ntBASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 AC135586.1-201ENST00000539323 574 ntBASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 AC011467.4-201ENST00000594891 528 ntBASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA11Q9Y5H2 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PCDHGA11Q9Y5H2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms