Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RAB3IPQ96QF0 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15□□□□□ -0.01
RAB3IPQ96QF0 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15□□□□□ -0.01
RAB3IPQ96QF0 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15□□□□□ -0.01
RAB3IPQ96QF0 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RAB3IPQ96QF0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15□□□□□ -0.01
RAB3IPQ96QF0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15□□□□□ -0.01
RAB3IPQ96QF0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15□□□□□ -0.01
RAB3IPQ96QF0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 TSSC2-201ENST00000450217 709 ntBASIC15□□□□□ -0.01
RAB3IPQ96QF0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15□□□□□ -0.01
RAB3IPQ96QF0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15□□□□□ -0.01
RAB3IPQ96QF0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15□□□□□ -0.01
RAB3IPQ96QF0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15□□□□□ -0.01
RAB3IPQ96QF0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RAB3IPQ96QF0 NKAPP1-205ENST00000585790 367 ntBASIC15□□□□□ -0.01
RAB3IPQ96QF0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RAB3IPQ96QF0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15□□□□□ -0.01
RAB3IPQ96QF0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15□□□□□ -0.01
RAB3IPQ96QF0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RAB3IPQ96QF0 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RAB3IPQ96QF0 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RAB3IPQ96QF0 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RAB3IPQ96QF0 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
RAB3IPQ96QF0 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAB3IPQ96QF0 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 PMS2P7-201ENST00000506558 1336 ntBASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 AC073548.1-201ENST00000624088 1882 ntBASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAB3IPQ96QF0 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms