Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAB3IL1Q8TBN0 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 AP000845.1-201ENST00000581677 2131 ntBASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 AC015656.1-201ENST00000624209 3578 ntBASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 AC074386.1-202ENST00000463561 864 ntBASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 AC116407.3-201ENST00000623905 1129 ntBASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 AC079781.5-202ENST00000641784 3743 ntBASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB3IL1Q8TBN0 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 RPL13AP23-201ENST00000480739 586 ntBASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB3IL1Q8TBN0 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAB3IL1Q8TBN0 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.33■□□□□ 0.05
RAB3IL1Q8TBN0 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.33■□□□□ 0.05
RAB3IL1Q8TBN0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAB3IL1Q8TBN0 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.33■□□□□ 0.05
RAB3IL1Q8TBN0 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAB3IL1Q8TBN0 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
RAB3IL1Q8TBN0 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAB3IL1Q8TBN0 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
RAB3IL1Q8TBN0 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.33■□□□□ 0.05
RAB3IL1Q8TBN0 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.33■□□□□ 0.05
RAB3IL1Q8TBN0 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
RAB3IL1Q8TBN0 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
RAB3IL1Q8TBN0 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms