Protein–RNA interactions for Protein: Q8N8W4

PNPLA1, Patatin-like phospholipase domain-containing protein 1, humanhuman

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNPLA1Q8N8W4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.54■□□□□ 0.08
PNPLA1Q8N8W4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PNPLA1Q8N8W4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PNPLA1Q8N8W4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.54■□□□□ 0.08
PNPLA1Q8N8W4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.54■□□□□ 0.08
PNPLA1Q8N8W4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.54■□□□□ 0.08
PNPLA1Q8N8W4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PNPLA1Q8N8W4 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PNPLA1Q8N8W4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PNPLA1Q8N8W4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.54■□□□□ 0.08
PNPLA1Q8N8W4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PNPLA1Q8N8W4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 AGAP7P-201ENST00000582299 2062 ntBASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 AGAP14-201ENST00000624701 2060 ntBASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 RN7SL399P-201ENST00000471648 279 ntBASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 RNA5SP412-201ENST00000516234 123 ntBASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 AL121723.1-201ENST00000445194 1519 ntBASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PNPLA1Q8N8W4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 AC007551.1-201ENST00000457394 519 ntBASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 MIR5189-201ENST00000577370 114 ntBASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.52■□□□□ 0.08
PNPLA1Q8N8W4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.52■□□□□ 0.07
PNPLA1Q8N8W4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
PNPLA1Q8N8W4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PNPLA1Q8N8W4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PNPLA1Q8N8W4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.52■□□□□ 0.07
PNPLA1Q8N8W4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PNPLA1Q8N8W4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PNPLA1Q8N8W4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PNPLA1Q8N8W4 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PNPLA1Q8N8W4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PNPLA1Q8N8W4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.52■□□□□ 0.07
PNPLA1Q8N8W4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.52■□□□□ 0.07
PNPLA1Q8N8W4 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PNPLA1Q8N8W4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.52■□□□□ 0.07
PNPLA1Q8N8W4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
PNPLA1Q8N8W4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PNPLA1Q8N8W4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PNPLA1Q8N8W4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PNPLA1Q8N8W4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.51■□□□□ 0.07
PNPLA1Q8N8W4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PNPLA1Q8N8W4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.51■□□□□ 0.07
PNPLA1Q8N8W4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PNPLA1Q8N8W4 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.51■□□□□ 0.07
PNPLA1Q8N8W4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PNPLA1Q8N8W4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PNPLA1Q8N8W4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms