Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF144AP50876 AC139749.1-202ENST00000617529 3139 ntBASIC14.32□□□□□ -0.12
RNF144AP50876 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
RNF144AP50876 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RNF144AP50876 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF144AP50876 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF144AP50876 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
RNF144AP50876 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF144AP50876 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF144AP50876 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
RNF144AP50876 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF144AP50876 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.32□□□□□ -0.12
RNF144AP50876 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.32□□□□□ -0.12
RNF144AP50876 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.32□□□□□ -0.12
RNF144AP50876 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.32□□□□□ -0.12
RNF144AP50876 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RNF144AP50876 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF144AP50876 TIMM17BP1-201ENST00000545713 516 ntBASIC14.32□□□□□ -0.12
RNF144AP50876 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.32□□□□□ -0.12
RNF144AP50876 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RNF144AP50876 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.32□□□□□ -0.12
RNF144AP50876 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.32□□□□□ -0.12
RNF144AP50876 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
RNF144AP50876 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 AC097376.2-205ENST00000610159 5334 ntBASIC14.32□□□□□ -0.12
RNF144AP50876 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RNF144AP50876 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF144AP50876 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RNF144AP50876 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF144AP50876 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF144AP50876 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF144AP50876 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.32□□□□□ -0.12
RNF144AP50876 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.32□□□□□ -0.12
RNF144AP50876 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
RNF144AP50876 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RNF144AP50876 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF144AP50876 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.31□□□□□ -0.12
RNF144AP50876 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF144AP50876 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.31□□□□□ -0.12
RNF144AP50876 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF144AP50876 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF144AP50876 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF144AP50876 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF144AP50876 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RNF144AP50876 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF144AP50876 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RNF144AP50876 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF144AP50876 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.31□□□□□ -0.12
RNF144AP50876 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF144AP50876 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF144AP50876 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF144AP50876 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.31□□□□□ -0.12
RNF144AP50876 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF144AP50876 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF144AP50876 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.31□□□□□ -0.12
RNF144AP50876 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RNF144AP50876 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
RNF144AP50876 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF144AP50876 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF144AP50876 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF144AP50876 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
RNF144AP50876 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RNF144AP50876 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RNF144AP50876 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.31□□□□□ -0.12
RNF144AP50876 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.31□□□□□ -0.12
RNF144AP50876 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.31□□□□□ -0.12
RNF144AP50876 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.31□□□□□ -0.12
RNF144AP50876 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.31□□□□□ -0.12
RNF144AP50876 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.31□□□□□ -0.12
RNF144AP50876 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.31□□□□□ -0.12
RNF144AP50876 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF144AP50876 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF144AP50876 AC015910.1-201ENST00000579400 975 ntBASIC14.31□□□□□ -0.12
RNF144AP50876 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.31□□□□□ -0.12
RNF144AP50876 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.31□□□□□ -0.12
RNF144AP50876 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms