Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM3P06753 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM3P06753 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.25■□□□□ 0.35
TPM3P06753 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM3P06753 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TPM3P06753 MST1P2-201ENST00000457982 2291 ntBASIC17.24■□□□□ 0.35
TPM3P06753 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.24■□□□□ 0.35
TPM3P06753 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM3P06753 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM3P06753 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM3P06753 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM3P06753 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM3P06753 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TPM3P06753 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.24■□□□□ 0.35
TPM3P06753 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.24■□□□□ 0.35
TPM3P06753 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.24■□□□□ 0.35
TPM3P06753 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
TPM3P06753 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TPM3P06753 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM3P06753 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TPM3P06753 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM3P06753 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TPM3P06753 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.24■□□□□ 0.35
TPM3P06753 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM3P06753 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TPM3P06753 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
TPM3P06753 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.24■□□□□ 0.35
TPM3P06753 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TPM3P06753 RN7SL589P-201ENST00000481268 310 ntBASIC17.24■□□□□ 0.35
TPM3P06753 FAM86C2P-203ENST00000528684 1004 ntBASIC17.24■□□□□ 0.35
TPM3P06753 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.24■□□□□ 0.35
TPM3P06753 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.24■□□□□ 0.35
TPM3P06753 AL691432.3-201ENST00000621860 400 ntBASIC17.24■□□□□ 0.35
TPM3P06753 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
TPM3P06753 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TPM3P06753 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TPM3P06753 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM3P06753 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM3P06753 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM3P06753 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TPM3P06753 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.24■□□□□ 0.35
TPM3P06753 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TPM3P06753 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TPM3P06753 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM3P06753 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TPM3P06753 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC17.24■□□□□ 0.35
TPM3P06753 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM3P06753 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM3P06753 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM3P06753 PEG13-201ENST00000631594 5667 ntBASIC17.23■□□□□ 0.35
TPM3P06753 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.23■□□□□ 0.35
TPM3P06753 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.23■□□□□ 0.35
TPM3P06753 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM3P06753 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM3P06753 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC17.23■□□□□ 0.35
TPM3P06753 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM3P06753 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM3P06753 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TPM3P06753 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM3P06753 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM3P06753 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM3P06753 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM3P06753 TNN-203ENST00000622870 3719 ntTSL 5 BASIC17.23■□□□□ 0.35
TPM3P06753 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM3P06753 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM3P06753 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM3P06753 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM3P06753 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM3P06753 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TPM3P06753 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.23■□□□□ 0.35
TPM3P06753 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM3P06753 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.23■□□□□ 0.35
TPM3P06753 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TPM3P06753 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
TPM3P06753 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TPM3P06753 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TPM3P06753 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM3P06753 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
TPM3P06753 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM3P06753 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM3P06753 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TPM3P06753 AC084364.1-201ENST00000551967 1556 ntBASIC17.23■□□□□ 0.35
TPM3P06753 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TPM3P06753 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC17.23■□□□□ 0.35
TPM3P06753 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TPM3P06753 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.22■□□□□ 0.35
TPM3P06753 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC17.22■□□□□ 0.35
TPM3P06753 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPM3P06753 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.22■□□□□ 0.35
TPM3P06753 AP001267.2-201ENST00000532619 2086 ntBASIC17.22■□□□□ 0.35
TPM3P06753 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPM3P06753 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TPM3P06753 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPM3P06753 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.22■□□□□ 0.35
TPM3P06753 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.22■□□□□ 0.35
TPM3P06753 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TPM3P06753 NIN-202ENST00000324330 4364 ntTSL 5 BASIC17.22■□□□□ 0.35
TPM3P06753 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPM3P06753 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPM3P06753 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms