Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.46□□□□□ -0.25
LCATP04180 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.46□□□□□ -0.25
LCATP04180 WASH3P-207ENST00000560956 1394 ntBASIC13.46□□□□□ -0.25
LCATP04180 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LCATP04180 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.46□□□□□ -0.25
LCATP04180 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
LCATP04180 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LCATP04180 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.46□□□□□ -0.25
LCATP04180 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LCATP04180 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LCATP04180 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.46□□□□□ -0.25
LCATP04180 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.46□□□□□ -0.25
LCATP04180 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
LCATP04180 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
LCATP04180 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LCATP04180 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LCATP04180 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LCATP04180 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LCATP04180 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.46□□□□□ -0.25
LCATP04180 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LCATP04180 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
LCATP04180 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
LCATP04180 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.46□□□□□ -0.25
LCATP04180 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.46□□□□□ -0.25
LCATP04180 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
LCATP04180 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LCATP04180 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LCATP04180 PMS2P2-201ENST00000425039 1128 ntBASIC13.46□□□□□ -0.25
LCATP04180 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.46□□□□□ -0.25
LCATP04180 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.46□□□□□ -0.25
LCATP04180 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.46□□□□□ -0.25
LCATP04180 AC004890.2-204ENST00000481968 304 ntBASIC13.46□□□□□ -0.25
LCATP04180 MEIS3P1-201ENST00000495167 958 ntBASIC13.46□□□□□ -0.25
LCATP04180 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LCATP04180 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LCATP04180 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.46□□□□□ -0.25
LCATP04180 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.46□□□□□ -0.25
LCATP04180 AC092337.1-201ENST00000568699 1129 ntBASIC13.46□□□□□ -0.25
LCATP04180 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.46□□□□□ -0.25
LCATP04180 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.46□□□□□ -0.25
LCATP04180 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.46□□□□□ -0.25
LCATP04180 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.46□□□□□ -0.25
LCATP04180 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.46□□□□□ -0.25
LCATP04180 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LCATP04180 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LCATP04180 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
LCATP04180 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.46□□□□□ -0.25
LCATP04180 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.46□□□□□ -0.25
LCATP04180 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LCATP04180 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LCATP04180 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
LCATP04180 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LCATP04180 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LCATP04180 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LCATP04180 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LCATP04180 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LCATP04180 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
LCATP04180 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LCATP04180 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.46□□□□□ -0.26
LCATP04180 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LCATP04180 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LCATP04180 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
LCATP04180 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LCATP04180 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LCATP04180 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.45□□□□□ -0.26
LCATP04180 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LCATP04180 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LCATP04180 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LCATP04180 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LCATP04180 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.45□□□□□ -0.26
LCATP04180 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LCATP04180 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
LCATP04180 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.45□□□□□ -0.26
LCATP04180 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LCATP04180 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LCATP04180 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LCATP04180 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LCATP04180 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LCATP04180 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.45□□□□□ -0.26
LCATP04180 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.45□□□□□ -0.26
LCATP04180 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LCATP04180 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.45□□□□□ -0.26
LCATP04180 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.45□□□□□ -0.26
LCATP04180 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.45□□□□□ -0.26
LCATP04180 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LCATP04180 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.45□□□□□ -0.26
LCATP04180 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LCATP04180 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.45□□□□□ -0.26
LCATP04180 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
LCATP04180 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LCATP04180 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.45□□□□□ -0.26
LCATP04180 AC008738.7-201ENST00000609744 511 ntBASIC13.45□□□□□ -0.26
LCATP04180 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LCATP04180 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.45□□□□□ -0.26
LCATP04180 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.45□□□□□ -0.26
LCATP04180 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LCATP04180 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LCATP04180 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LCATP04180 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
LCATP04180 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms