Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LTN1O94822 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.77■□□□□ 0.76
LTN1O94822 RAN-210ENST00000541630 1475 ntTSL 2 BASIC19.77■□□□□ 0.76
LTN1O94822 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LTN1O94822 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LTN1O94822 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LTN1O94822 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LTN1O94822 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LTN1O94822 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LTN1O94822 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC19.77■□□□□ 0.76
LTN1O94822 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
LTN1O94822 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LTN1O94822 NAGK-204ENST00000443872 878 ntTSL 3 BASIC19.77■□□□□ 0.76
LTN1O94822 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
LTN1O94822 PHBP15-201ENST00000574228 665 ntBASIC19.77■□□□□ 0.76
LTN1O94822 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC19.77■□□□□ 0.76
LTN1O94822 MIR3147-201ENST00000577811 66 ntBASIC19.77■□□□□ 0.76
LTN1O94822 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
LTN1O94822 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LTN1O94822 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
LTN1O94822 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LTN1O94822 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC19.77■□□□□ 0.75
LTN1O94822 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
LTN1O94822 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
LTN1O94822 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.77■□□□□ 0.75
LTN1O94822 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LTN1O94822 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LTN1O94822 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LTN1O94822 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC19.76■□□□□ 0.75
LTN1O94822 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
LTN1O94822 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LTN1O94822 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LTN1O94822 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LTN1O94822 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC19.76■□□□□ 0.75
LTN1O94822 AL355334.1-201ENST00000417713 215 ntBASIC19.76■□□□□ 0.75
LTN1O94822 RN7SL258P-201ENST00000478664 300 ntBASIC19.76■□□□□ 0.75
LTN1O94822 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LTN1O94822 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LTN1O94822 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC19.76■□□□□ 0.75
LTN1O94822 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.76■□□□□ 0.75
LTN1O94822 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC19.76■□□□□ 0.75
LTN1O94822 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LTN1O94822 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LTN1O94822 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LTN1O94822 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LTN1O94822 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LTN1O94822 PCDHGB8P-201ENST00000502926 1973 ntBASIC19.75■□□□□ 0.75
LTN1O94822 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
LTN1O94822 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LTN1O94822 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC19.75■□□□□ 0.75
LTN1O94822 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC19.75■□□□□ 0.75
LTN1O94822 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LTN1O94822 NAT9-220ENST00000582870 896 ntTSL 5 BASIC19.75■□□□□ 0.75
LTN1O94822 AC027601.3-201ENST00000622907 509 ntBASIC19.75■□□□□ 0.75
LTN1O94822 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.75■□□□□ 0.75
LTN1O94822 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LTN1O94822 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC19.75■□□□□ 0.75
LTN1O94822 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LTN1O94822 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LTN1O94822 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LTN1O94822 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LTN1O94822 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LTN1O94822 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC19.75■□□□□ 0.75
LTN1O94822 IGHV3-37-201ENST00000518544 340 ntBASIC19.75■□□□□ 0.75
LTN1O94822 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LTN1O94822 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
LTN1O94822 MIR4750-201ENST00000584564 56 ntBASIC19.75■□□□□ 0.75
LTN1O94822 KHSRPP1-201ENST00000427983 1768 ntBASIC19.75■□□□□ 0.75
LTN1O94822 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LTN1O94822 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.74■□□□□ 0.75
LTN1O94822 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LTN1O94822 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
LTN1O94822 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC19.74■□□□□ 0.75
LTN1O94822 WASH3P-207ENST00000560956 1394 ntBASIC19.74■□□□□ 0.75
LTN1O94822 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LTN1O94822 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
LTN1O94822 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
LTN1O94822 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
LTN1O94822 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LTN1O94822 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.74■□□□□ 0.75
LTN1O94822 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
LTN1O94822 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LTN1O94822 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LTN1O94822 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC19.74■□□□□ 0.75
LTN1O94822 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC19.74■□□□□ 0.75
LTN1O94822 AC239868.1-201ENST00000369385 493 ntBASIC19.74■□□□□ 0.75
LTN1O94822 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
LTN1O94822 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LTN1O94822 AP000356.3-201ENST00000382243 753 ntBASIC19.74■□□□□ 0.75
LTN1O94822 AL583805.1-201ENST00000391389 531 ntBASIC19.74■□□□□ 0.75
LTN1O94822 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LTN1O94822 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC19.74■□□□□ 0.75
LTN1O94822 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LTN1O94822 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC19.74■□□□□ 0.75
LTN1O94822 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC19.74■□□□□ 0.75
LTN1O94822 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
LTN1O94822 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LTN1O94822 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LTN1O94822 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LTN1O94822 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms