Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
EXOSC1Q9Y3B2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
EXOSC1Q9Y3B2 SMPD5-203ENST00000639008 1464 ntBASIC20.63■□□□□ 0.89
EXOSC1Q9Y3B2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
EXOSC1Q9Y3B2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
EXOSC1Q9Y3B2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EXOSC1Q9Y3B2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EXOSC1Q9Y3B2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.63■□□□□ 0.89
EXOSC1Q9Y3B2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EXOSC1Q9Y3B2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EXOSC1Q9Y3B2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
EXOSC1Q9Y3B2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.63■□□□□ 0.89
EXOSC1Q9Y3B2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.63■□□□□ 0.89
EXOSC1Q9Y3B2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EXOSC1Q9Y3B2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
EXOSC1Q9Y3B2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EXOSC1Q9Y3B2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
EXOSC1Q9Y3B2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
EXOSC1Q9Y3B2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EXOSC1Q9Y3B2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EXOSC1Q9Y3B2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EXOSC1Q9Y3B2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
EXOSC1Q9Y3B2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EXOSC1Q9Y3B2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EXOSC1Q9Y3B2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EXOSC1Q9Y3B2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.62■□□□□ 0.89
EXOSC1Q9Y3B2 ZNRF2P2-203ENST00000454624 420 ntBASIC20.62■□□□□ 0.89
EXOSC1Q9Y3B2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.62■□□□□ 0.89
EXOSC1Q9Y3B2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
EXOSC1Q9Y3B2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EXOSC1Q9Y3B2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
EXOSC1Q9Y3B2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EXOSC1Q9Y3B2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
EXOSC1Q9Y3B2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.61■□□□□ 0.89
EXOSC1Q9Y3B2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EXOSC1Q9Y3B2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EXOSC1Q9Y3B2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EXOSC1Q9Y3B2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EXOSC1Q9Y3B2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
EXOSC1Q9Y3B2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EXOSC1Q9Y3B2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.6■□□□□ 0.89
EXOSC1Q9Y3B2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
EXOSC1Q9Y3B2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
EXOSC1Q9Y3B2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EXOSC1Q9Y3B2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
EXOSC1Q9Y3B2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EXOSC1Q9Y3B2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
EXOSC1Q9Y3B2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EXOSC1Q9Y3B2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.6■□□□□ 0.89
EXOSC1Q9Y3B2 ANOS2P-203ENST00000472227 1816 ntBASIC20.6■□□□□ 0.89
EXOSC1Q9Y3B2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.59■□□□□ 0.89
EXOSC1Q9Y3B2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EXOSC1Q9Y3B2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EXOSC1Q9Y3B2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EXOSC1Q9Y3B2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EXOSC1Q9Y3B2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.59■□□□□ 0.89
EXOSC1Q9Y3B2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.59■□□□□ 0.89
EXOSC1Q9Y3B2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EXOSC1Q9Y3B2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
EXOSC1Q9Y3B2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
EXOSC1Q9Y3B2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
EXOSC1Q9Y3B2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
EXOSC1Q9Y3B2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
EXOSC1Q9Y3B2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
EXOSC1Q9Y3B2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.58■□□□□ 0.89
EXOSC1Q9Y3B2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
EXOSC1Q9Y3B2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.58■□□□□ 0.89
EXOSC1Q9Y3B2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
EXOSC1Q9Y3B2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
EXOSC1Q9Y3B2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EXOSC1Q9Y3B2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EXOSC1Q9Y3B2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EXOSC1Q9Y3B2 KRT18P10-201ENST00000388836 1287 ntBASIC20.57■□□□□ 0.88
EXOSC1Q9Y3B2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.57■□□□□ 0.88
EXOSC1Q9Y3B2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EXOSC1Q9Y3B2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EXOSC1Q9Y3B2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EXOSC1Q9Y3B2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EXOSC1Q9Y3B2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EXOSC1Q9Y3B2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.56■□□□□ 0.88
EXOSC1Q9Y3B2 AC060814.1-201ENST00000554326 538 ntBASIC20.56■□□□□ 0.88
EXOSC1Q9Y3B2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.56■□□□□ 0.88
EXOSC1Q9Y3B2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EXOSC1Q9Y3B2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EXOSC1Q9Y3B2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.55■□□□□ 0.88
EXOSC1Q9Y3B2 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.55■□□□□ 0.88
EXOSC1Q9Y3B2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.55■□□□□ 0.88
EXOSC1Q9Y3B2 DUSP8P3-201ENST00000399571 1760 ntBASIC20.55■□□□□ 0.88
EXOSC1Q9Y3B2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EXOSC1Q9Y3B2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.55■□□□□ 0.88
EXOSC1Q9Y3B2 RPS2P35-201ENST00000443417 897 ntBASIC20.55■□□□□ 0.88
EXOSC1Q9Y3B2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
EXOSC1Q9Y3B2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
EXOSC1Q9Y3B2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EXOSC1Q9Y3B2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
EXOSC1Q9Y3B2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EXOSC1Q9Y3B2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
EXOSC1Q9Y3B2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EXOSC1Q9Y3B2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.54■□□□□ 0.88
EXOSC1Q9Y3B2 AC092068.2-201ENST00000590491 1708 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms