Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.96■□□□□ 0.79
NUP50Q9UKX7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NUP50Q9UKX7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
NUP50Q9UKX7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUP50Q9UKX7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NUP50Q9UKX7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.95■□□□□ 0.78
NUP50Q9UKX7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUP50Q9UKX7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.95■□□□□ 0.78
NUP50Q9UKX7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
NUP50Q9UKX7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NUP50Q9UKX7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.95■□□□□ 0.78
NUP50Q9UKX7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUP50Q9UKX7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NUP50Q9UKX7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP50Q9UKX7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP50Q9UKX7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP50Q9UKX7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP50Q9UKX7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.94■□□□□ 0.78
NUP50Q9UKX7 AC010980.1-201ENST00000587192 1142 ntBASIC19.94■□□□□ 0.78
NUP50Q9UKX7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP50Q9UKX7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NUP50Q9UKX7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP50Q9UKX7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP50Q9UKX7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
NUP50Q9UKX7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUP50Q9UKX7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUP50Q9UKX7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUP50Q9UKX7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
NUP50Q9UKX7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.93■□□□□ 0.78
NUP50Q9UKX7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
NUP50Q9UKX7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUP50Q9UKX7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUP50Q9UKX7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUP50Q9UKX7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.93■□□□□ 0.78
NUP50Q9UKX7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUP50Q9UKX7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUP50Q9UKX7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUP50Q9UKX7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUP50Q9UKX7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.92■□□□□ 0.78
NUP50Q9UKX7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.92■□□□□ 0.78
NUP50Q9UKX7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUP50Q9UKX7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.92■□□□□ 0.78
NUP50Q9UKX7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NUP50Q9UKX7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.92■□□□□ 0.78
NUP50Q9UKX7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.92■□□□□ 0.78
NUP50Q9UKX7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUP50Q9UKX7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUP50Q9UKX7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NUP50Q9UKX7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.91■□□□□ 0.78
NUP50Q9UKX7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.91■□□□□ 0.78
NUP50Q9UKX7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUP50Q9UKX7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUP50Q9UKX7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
NUP50Q9UKX7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUP50Q9UKX7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.91■□□□□ 0.78
NUP50Q9UKX7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
NUP50Q9UKX7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUP50Q9UKX7 C1orf229-201ENST00000623686 2258 ntBASIC19.9■□□□□ 0.78
NUP50Q9UKX7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUP50Q9UKX7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUP50Q9UKX7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUP50Q9UKX7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NUP50Q9UKX7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.9■□□□□ 0.78
NUP50Q9UKX7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NUP50Q9UKX7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NUP50Q9UKX7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.9■□□□□ 0.78
NUP50Q9UKX7 PKD1P6-201ENST00000343738 4769 ntBASIC19.89■□□□□ 0.78
NUP50Q9UKX7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NUP50Q9UKX7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NUP50Q9UKX7 YBX1P4-201ENST00000392794 808 ntBASIC19.89■□□□□ 0.77
NUP50Q9UKX7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.89■□□□□ 0.77
NUP50Q9UKX7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NUP50Q9UKX7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NUP50Q9UKX7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NUP50Q9UKX7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUP50Q9UKX7 AL117328.2-201ENST00000624617 1940 ntBASIC19.88■□□□□ 0.77
NUP50Q9UKX7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUP50Q9UKX7 KRT8P33-201ENST00000508125 1423 ntBASIC19.88■□□□□ 0.77
NUP50Q9UKX7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.88■□□□□ 0.77
NUP50Q9UKX7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.88■□□□□ 0.77
NUP50Q9UKX7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.88■□□□□ 0.77
NUP50Q9UKX7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NUP50Q9UKX7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUP50Q9UKX7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUP50Q9UKX7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NUP50Q9UKX7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NUP50Q9UKX7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NUP50Q9UKX7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NUP50Q9UKX7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NUP50Q9UKX7 DUSP8P5-201ENST00000422884 1815 ntBASIC19.87■□□□□ 0.77
NUP50Q9UKX7 LINC00565-201ENST00000562710 2331 ntBASIC19.87■□□□□ 0.77
NUP50Q9UKX7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NUP50Q9UKX7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUP50Q9UKX7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.86■□□□□ 0.77
NUP50Q9UKX7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NUP50Q9UKX7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NUP50Q9UKX7 AL451085.2-201ENST00000605085 799 ntBASIC19.86■□□□□ 0.77
NUP50Q9UKX7 AL035685.1-201ENST00000636663 812 ntBASIC19.86■□□□□ 0.77
NUP50Q9UKX7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
NUP50Q9UKX7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms