Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX41Q9UJV9 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.5■■□□□ 1.83
DDX41Q9UJV9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX41Q9UJV9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.5■■□□□ 1.83
DDX41Q9UJV9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.5■■□□□ 1.83
DDX41Q9UJV9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
DDX41Q9UJV9 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX41Q9UJV9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
DDX41Q9UJV9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
DDX41Q9UJV9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX41Q9UJV9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX41Q9UJV9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
DDX41Q9UJV9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
DDX41Q9UJV9 AC090877.2-201ENST00000558441 1738 ntBASIC26.49■■□□□ 1.83
DDX41Q9UJV9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
DDX41Q9UJV9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
DDX41Q9UJV9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.49■■□□□ 1.83
DDX41Q9UJV9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.49■■□□□ 1.83
DDX41Q9UJV9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.49■■□□□ 1.83
DDX41Q9UJV9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.49■■□□□ 1.83
DDX41Q9UJV9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
DDX41Q9UJV9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
DDX41Q9UJV9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
DDX41Q9UJV9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.48■■□□□ 1.83
DDX41Q9UJV9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.48■■□□□ 1.83
DDX41Q9UJV9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.48■■□□□ 1.83
DDX41Q9UJV9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.48■■□□□ 1.83
DDX41Q9UJV9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.48■■□□□ 1.83
DDX41Q9UJV9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
DDX41Q9UJV9 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
DDX41Q9UJV9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.47■■□□□ 1.83
DDX41Q9UJV9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
DDX41Q9UJV9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.47■■□□□ 1.83
DDX41Q9UJV9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.47■■□□□ 1.83
DDX41Q9UJV9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
DDX41Q9UJV9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
DDX41Q9UJV9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
DDX41Q9UJV9 AC092803.2-201ENST00000564287 1899 ntBASIC26.47■■□□□ 1.83
DDX41Q9UJV9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
DDX41Q9UJV9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.46■■□□□ 1.83
DDX41Q9UJV9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
DDX41Q9UJV9 MTDHP2-201ENST00000601468 714 ntBASIC26.46■■□□□ 1.83
DDX41Q9UJV9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.46■■□□□ 1.83
DDX41Q9UJV9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
DDX41Q9UJV9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
DDX41Q9UJV9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC26.46■■□□□ 1.83
DDX41Q9UJV9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
DDX41Q9UJV9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
DDX41Q9UJV9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
DDX41Q9UJV9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
DDX41Q9UJV9 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.45■■□□□ 1.82
DDX41Q9UJV9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.82
DDX41Q9UJV9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.45■■□□□ 1.82
DDX41Q9UJV9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.45■■□□□ 1.82
DDX41Q9UJV9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.45■■□□□ 1.82
DDX41Q9UJV9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.45■■□□□ 1.82
DDX41Q9UJV9 MIR6724-1-201ENST00000616420 92 ntBASIC26.45■■□□□ 1.82
DDX41Q9UJV9 MIR6724-2-201ENST00000616483 92 ntBASIC26.45■■□□□ 1.82
DDX41Q9UJV9 MIR6724-4-201ENST00000617390 92 ntBASIC26.45■■□□□ 1.82
DDX41Q9UJV9 MIR6724-3-201ENST00000622482 92 ntBASIC26.45■■□□□ 1.82
DDX41Q9UJV9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.45■■□□□ 1.82
DDX41Q9UJV9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.45■■□□□ 1.82
DDX41Q9UJV9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
DDX41Q9UJV9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.44■■□□□ 1.82
DDX41Q9UJV9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
DDX41Q9UJV9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
DDX41Q9UJV9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC26.44■■□□□ 1.82
DDX41Q9UJV9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
DDX41Q9UJV9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.44■■□□□ 1.82
DDX41Q9UJV9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
DDX41Q9UJV9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.43■■□□□ 1.82
DDX41Q9UJV9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
DDX41Q9UJV9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC26.43■■□□□ 1.82
DDX41Q9UJV9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.43■■□□□ 1.82
DDX41Q9UJV9 AL117332.1-201ENST00000622628 974 ntBASIC26.43■■□□□ 1.82
DDX41Q9UJV9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.43■■□□□ 1.82
DDX41Q9UJV9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
DDX41Q9UJV9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
DDX41Q9UJV9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
DDX41Q9UJV9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.42■■□□□ 1.82
DDX41Q9UJV9 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.42■■□□□ 1.82
DDX41Q9UJV9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.42■■□□□ 1.82
DDX41Q9UJV9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.42■■□□□ 1.82
DDX41Q9UJV9 AC019069.1-201ENST00000610008 1333 ntBASIC26.41■■□□□ 1.82
DDX41Q9UJV9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
DDX41Q9UJV9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
DDX41Q9UJV9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.41■■□□□ 1.82
DDX41Q9UJV9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.41■■□□□ 1.82
DDX41Q9UJV9 AC131281.2-201ENST00000520478 145 ntBASIC26.41■■□□□ 1.82
DDX41Q9UJV9 MIR3621-201ENST00000580529 85 ntBASIC26.41■■□□□ 1.82
DDX41Q9UJV9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
DDX41Q9UJV9 AC012676.1-201ENST00000574705 1949 ntBASIC26.41■■□□□ 1.82
DDX41Q9UJV9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
DDX41Q9UJV9 DUSP8P4-201ENST00000399538 1761 ntBASIC26.41■■□□□ 1.82
DDX41Q9UJV9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
DDX41Q9UJV9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.4■■□□□ 1.82
DDX41Q9UJV9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.4■■□□□ 1.82
DDX41Q9UJV9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
DDX41Q9UJV9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.4■■□□□ 1.82
DDX41Q9UJV9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.39■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms