Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HINT3Q9NQE9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.82■□□□□ 0.92
HINT3Q9NQE9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HINT3Q9NQE9 KRT18P60-201ENST00000312876 1297 ntBASIC20.82■□□□□ 0.92
HINT3Q9NQE9 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HINT3Q9NQE9 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.82■□□□□ 0.92
HINT3Q9NQE9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HINT3Q9NQE9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.82■□□□□ 0.92
HINT3Q9NQE9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
HINT3Q9NQE9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HINT3Q9NQE9 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HINT3Q9NQE9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
HINT3Q9NQE9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HINT3Q9NQE9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.82■□□□□ 0.92
HINT3Q9NQE9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HINT3Q9NQE9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
HINT3Q9NQE9 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HINT3Q9NQE9 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HINT3Q9NQE9 AC012354.3-201ENST00000623734 483 ntBASIC20.81■□□□□ 0.92
HINT3Q9NQE9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HINT3Q9NQE9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HINT3Q9NQE9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HINT3Q9NQE9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HINT3Q9NQE9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HINT3Q9NQE9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.8■□□□□ 0.92
HINT3Q9NQE9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
HINT3Q9NQE9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.8■□□□□ 0.92
HINT3Q9NQE9 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HINT3Q9NQE9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.8■□□□□ 0.92
HINT3Q9NQE9 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
HINT3Q9NQE9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.8■□□□□ 0.92
HINT3Q9NQE9 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HINT3Q9NQE9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.8■□□□□ 0.92
HINT3Q9NQE9 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HINT3Q9NQE9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.8■□□□□ 0.92
HINT3Q9NQE9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HINT3Q9NQE9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
HINT3Q9NQE9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
HINT3Q9NQE9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.79■□□□□ 0.92
HINT3Q9NQE9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HINT3Q9NQE9 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HINT3Q9NQE9 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.79■□□□□ 0.92
HINT3Q9NQE9 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HINT3Q9NQE9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HINT3Q9NQE9 AL592293.1-201ENST00000502889 1188 ntBASIC20.79■□□□□ 0.92
HINT3Q9NQE9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.79■□□□□ 0.92
HINT3Q9NQE9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HINT3Q9NQE9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.78■□□□□ 0.92
HINT3Q9NQE9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HINT3Q9NQE9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HINT3Q9NQE9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HINT3Q9NQE9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HINT3Q9NQE9 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HINT3Q9NQE9 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HINT3Q9NQE9 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HINT3Q9NQE9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HINT3Q9NQE9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HINT3Q9NQE9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
HINT3Q9NQE9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HINT3Q9NQE9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HINT3Q9NQE9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
HINT3Q9NQE9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
HINT3Q9NQE9 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HINT3Q9NQE9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HINT3Q9NQE9 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.76■□□□□ 0.91
HINT3Q9NQE9 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
HINT3Q9NQE9 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.76■□□□□ 0.91
HINT3Q9NQE9 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HINT3Q9NQE9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.76■□□□□ 0.91
HINT3Q9NQE9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.75■□□□□ 0.91
HINT3Q9NQE9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HINT3Q9NQE9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HINT3Q9NQE9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.75■□□□□ 0.91
HINT3Q9NQE9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HINT3Q9NQE9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HINT3Q9NQE9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HINT3Q9NQE9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HINT3Q9NQE9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HINT3Q9NQE9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
HINT3Q9NQE9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.75■□□□□ 0.91
HINT3Q9NQE9 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HINT3Q9NQE9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HINT3Q9NQE9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HINT3Q9NQE9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HINT3Q9NQE9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
HINT3Q9NQE9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HINT3Q9NQE9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HINT3Q9NQE9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
HINT3Q9NQE9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HINT3Q9NQE9 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HINT3Q9NQE9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
HINT3Q9NQE9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HINT3Q9NQE9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HINT3Q9NQE9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HINT3Q9NQE9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HINT3Q9NQE9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HINT3Q9NQE9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HINT3Q9NQE9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
HINT3Q9NQE9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.73■□□□□ 0.91
HINT3Q9NQE9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms