Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ZCCHC4Q9H5U6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZCCHC4Q9H5U6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZCCHC4Q9H5U6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.25■□□□□ 0.83
ZCCHC4Q9H5U6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZCCHC4Q9H5U6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.25■□□□□ 0.83
ZCCHC4Q9H5U6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZCCHC4Q9H5U6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZCCHC4Q9H5U6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
ZCCHC4Q9H5U6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZCCHC4Q9H5U6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ZCCHC4Q9H5U6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.25■□□□□ 0.83
ZCCHC4Q9H5U6 KRT18P10-201ENST00000388836 1287 ntBASIC20.25■□□□□ 0.83
ZCCHC4Q9H5U6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
ZCCHC4Q9H5U6 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.25■□□□□ 0.83
ZCCHC4Q9H5U6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ZCCHC4Q9H5U6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZCCHC4Q9H5U6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZCCHC4Q9H5U6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
ZCCHC4Q9H5U6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZCCHC4Q9H5U6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.25■□□□□ 0.83
ZCCHC4Q9H5U6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZCCHC4Q9H5U6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZCCHC4Q9H5U6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ZCCHC4Q9H5U6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZCCHC4Q9H5U6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZCCHC4Q9H5U6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ZCCHC4Q9H5U6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZCCHC4Q9H5U6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZCCHC4Q9H5U6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ZCCHC4Q9H5U6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZCCHC4Q9H5U6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZCCHC4Q9H5U6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZCCHC4Q9H5U6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZCCHC4Q9H5U6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZCCHC4Q9H5U6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZCCHC4Q9H5U6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZCCHC4Q9H5U6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.23■□□□□ 0.83
ZCCHC4Q9H5U6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
ZCCHC4Q9H5U6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZCCHC4Q9H5U6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.23■□□□□ 0.83
ZCCHC4Q9H5U6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZCCHC4Q9H5U6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.23■□□□□ 0.83
ZCCHC4Q9H5U6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ZCCHC4Q9H5U6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.22■□□□□ 0.83
ZCCHC4Q9H5U6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ZCCHC4Q9H5U6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ZCCHC4Q9H5U6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZCCHC4Q9H5U6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.22■□□□□ 0.83
ZCCHC4Q9H5U6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZCCHC4Q9H5U6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZCCHC4Q9H5U6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZCCHC4Q9H5U6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.21■□□□□ 0.83
ZCCHC4Q9H5U6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZCCHC4Q9H5U6 RAP2CP1-202ENST00000605179 643 ntBASIC20.21■□□□□ 0.83
ZCCHC4Q9H5U6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZCCHC4Q9H5U6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.2■□□□□ 0.83
ZCCHC4Q9H5U6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ZCCHC4Q9H5U6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZCCHC4Q9H5U6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.2■□□□□ 0.82
ZCCHC4Q9H5U6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZCCHC4Q9H5U6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
ZCCHC4Q9H5U6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZCCHC4Q9H5U6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZCCHC4Q9H5U6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZCCHC4Q9H5U6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZCCHC4Q9H5U6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZCCHC4Q9H5U6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZCCHC4Q9H5U6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZCCHC4Q9H5U6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZCCHC4Q9H5U6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZCCHC4Q9H5U6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZCCHC4Q9H5U6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.19■□□□□ 0.82
ZCCHC4Q9H5U6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.19■□□□□ 0.82
ZCCHC4Q9H5U6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.19■□□□□ 0.82
ZCCHC4Q9H5U6 FOXO3B-201ENST00000395675 1928 ntBASIC20.19■□□□□ 0.82
ZCCHC4Q9H5U6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZCCHC4Q9H5U6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZCCHC4Q9H5U6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZCCHC4Q9H5U6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZCCHC4Q9H5U6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.18■□□□□ 0.82
ZCCHC4Q9H5U6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZCCHC4Q9H5U6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.18■□□□□ 0.82
ZCCHC4Q9H5U6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ZCCHC4Q9H5U6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.18■□□□□ 0.82
ZCCHC4Q9H5U6 AC026202.3-201ENST00000600805 1127 ntBASIC20.18■□□□□ 0.82
ZCCHC4Q9H5U6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZCCHC4Q9H5U6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.17■□□□□ 0.82
ZCCHC4Q9H5U6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZCCHC4Q9H5U6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.17■□□□□ 0.82
ZCCHC4Q9H5U6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZCCHC4Q9H5U6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZCCHC4Q9H5U6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZCCHC4Q9H5U6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZCCHC4Q9H5U6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZCCHC4Q9H5U6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZCCHC4Q9H5U6 GPX1-201ENST00000419349 1106 ntBASIC20.16■□□□□ 0.82
ZCCHC4Q9H5U6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.16■□□□□ 0.82
ZCCHC4Q9H5U6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.16■□□□□ 0.82
ZCCHC4Q9H5U6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms