Protein–RNA interactions for Protein: Q9GZV3

SLC5A7, High affinity choline transporter 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A7Q9GZV3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC5A7Q9GZV3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SLC5A7Q9GZV3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SLC5A7Q9GZV3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC5A7Q9GZV3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SLC5A7Q9GZV3 AC060814.1-201ENST00000554326 538 ntBASIC19.4■□□□□ 0.7
SLC5A7Q9GZV3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC5A7Q9GZV3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SLC5A7Q9GZV3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC5A7Q9GZV3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC5A7Q9GZV3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC5A7Q9GZV3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC5A7Q9GZV3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.39■□□□□ 0.7
SLC5A7Q9GZV3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLC5A7Q9GZV3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC5A7Q9GZV3 AC004812.2-201ENST00000611079 2094 ntBASIC19.39■□□□□ 0.69
SLC5A7Q9GZV3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC5A7Q9GZV3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC5A7Q9GZV3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC5A7Q9GZV3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC5A7Q9GZV3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC5A7Q9GZV3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC5A7Q9GZV3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC5A7Q9GZV3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SLC5A7Q9GZV3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC5A7Q9GZV3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC5A7Q9GZV3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC5A7Q9GZV3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SLC5A7Q9GZV3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC5A7Q9GZV3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC5A7Q9GZV3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC5A7Q9GZV3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC5A7Q9GZV3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC5A7Q9GZV3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC5A7Q9GZV3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SLC5A7Q9GZV3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC5A7Q9GZV3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC5A7Q9GZV3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC5A7Q9GZV3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC5A7Q9GZV3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC5A7Q9GZV3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC5A7Q9GZV3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC5A7Q9GZV3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC5A7Q9GZV3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC5A7Q9GZV3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC5A7Q9GZV3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC5A7Q9GZV3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SLC5A7Q9GZV3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC5A7Q9GZV3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC5A7Q9GZV3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC5A7Q9GZV3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC5A7Q9GZV3 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC5A7Q9GZV3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC5A7Q9GZV3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.35■□□□□ 0.69
SLC5A7Q9GZV3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC5A7Q9GZV3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC5A7Q9GZV3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC5A7Q9GZV3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC5A7Q9GZV3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC5A7Q9GZV3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC5A7Q9GZV3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC5A7Q9GZV3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SLC5A7Q9GZV3 ABCB10P4-201ENST00000566803 2184 ntBASIC19.34■□□□□ 0.69
SLC5A7Q9GZV3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC5A7Q9GZV3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SLC5A7Q9GZV3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
SLC5A7Q9GZV3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.33■□□□□ 0.69
SLC5A7Q9GZV3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC5A7Q9GZV3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC5A7Q9GZV3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC5A7Q9GZV3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC5A7Q9GZV3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC5A7Q9GZV3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC5A7Q9GZV3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC5A7Q9GZV3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC5A7Q9GZV3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC5A7Q9GZV3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SLC5A7Q9GZV3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC5A7Q9GZV3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
SLC5A7Q9GZV3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SLC5A7Q9GZV3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC5A7Q9GZV3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC5A7Q9GZV3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC5A7Q9GZV3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SLC5A7Q9GZV3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.32■□□□□ 0.68
SLC5A7Q9GZV3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC5A7Q9GZV3 AC092296.2-201ENST00000589470 999 ntBASIC19.32■□□□□ 0.68
SLC5A7Q9GZV3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC5A7Q9GZV3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SLC5A7Q9GZV3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC5A7Q9GZV3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.32■□□□□ 0.68
SLC5A7Q9GZV3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
SLC5A7Q9GZV3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC5A7Q9GZV3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC5A7Q9GZV3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SLC5A7Q9GZV3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC5A7Q9GZV3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC5A7Q9GZV3 RP9P-202ENST00000450133 1212 ntBASIC19.31■□□□□ 0.68
SLC5A7Q9GZV3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC5A7Q9GZV3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms