Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.21■□□□□ 0.83
RAB40AQ8WXH6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB40AQ8WXH6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB40AQ8WXH6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB40AQ8WXH6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RAB40AQ8WXH6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB40AQ8WXH6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RAB40AQ8WXH6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RAB40AQ8WXH6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB40AQ8WXH6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB40AQ8WXH6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB40AQ8WXH6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RAB40AQ8WXH6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.19■□□□□ 0.82
RAB40AQ8WXH6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
RAB40AQ8WXH6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB40AQ8WXH6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.19■□□□□ 0.82
RAB40AQ8WXH6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RAB40AQ8WXH6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.19■□□□□ 0.82
RAB40AQ8WXH6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAB40AQ8WXH6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RAB40AQ8WXH6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.18■□□□□ 0.82
RAB40AQ8WXH6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB40AQ8WXH6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB40AQ8WXH6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB40AQ8WXH6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB40AQ8WXH6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB40AQ8WXH6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RAB40AQ8WXH6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB40AQ8WXH6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB40AQ8WXH6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB40AQ8WXH6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RAB40AQ8WXH6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB40AQ8WXH6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.17■□□□□ 0.82
RAB40AQ8WXH6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.17■□□□□ 0.82
RAB40AQ8WXH6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.17■□□□□ 0.82
RAB40AQ8WXH6 CLDN5-201ENST00000403084 2357 ntBASIC20.17■□□□□ 0.82
RAB40AQ8WXH6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB40AQ8WXH6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB40AQ8WXH6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB40AQ8WXH6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB40AQ8WXH6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RAB40AQ8WXH6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB40AQ8WXH6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB40AQ8WXH6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RAB40AQ8WXH6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RAB40AQ8WXH6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
RAB40AQ8WXH6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RAB40AQ8WXH6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RAB40AQ8WXH6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB40AQ8WXH6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.16■□□□□ 0.82
RAB40AQ8WXH6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB40AQ8WXH6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB40AQ8WXH6 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB40AQ8WXH6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.15■□□□□ 0.82
RAB40AQ8WXH6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB40AQ8WXH6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB40AQ8WXH6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB40AQ8WXH6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.15■□□□□ 0.82
RAB40AQ8WXH6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RAB40AQ8WXH6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB40AQ8WXH6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB40AQ8WXH6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RAB40AQ8WXH6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB40AQ8WXH6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAB40AQ8WXH6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.14■□□□□ 0.81
RAB40AQ8WXH6 DUX4L18-201ENST00000553347 1267 ntBASIC20.14■□□□□ 0.81
RAB40AQ8WXH6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB40AQ8WXH6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.14■□□□□ 0.81
RAB40AQ8WXH6 AL117328.2-201ENST00000624617 1940 ntBASIC20.14■□□□□ 0.81
RAB40AQ8WXH6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAB40AQ8WXH6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.13■□□□□ 0.81
RAB40AQ8WXH6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB40AQ8WXH6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB40AQ8WXH6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.13■□□□□ 0.81
RAB40AQ8WXH6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.13■□□□□ 0.81
RAB40AQ8WXH6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RAB40AQ8WXH6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAB40AQ8WXH6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB40AQ8WXH6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RAB40AQ8WXH6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RAB40AQ8WXH6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RAB40AQ8WXH6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB40AQ8WXH6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.12■□□□□ 0.81
RAB40AQ8WXH6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB40AQ8WXH6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.12■□□□□ 0.81
RAB40AQ8WXH6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB40AQ8WXH6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB40AQ8WXH6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB40AQ8WXH6 C9orf163-202ENST00000624034 2573 ntBASIC20.12■□□□□ 0.81
RAB40AQ8WXH6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB40AQ8WXH6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB40AQ8WXH6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB40AQ8WXH6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB40AQ8WXH6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB40AQ8WXH6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.11■□□□□ 0.81
RAB40AQ8WXH6 DUX4L9-201ENST00000449051 1259 ntBASIC20.11■□□□□ 0.81
RAB40AQ8WXH6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RAB40AQ8WXH6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB40AQ8WXH6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB40AQ8WXH6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms