Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC39.83■■■■□ 3.97
TRIM41Q8WV44 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.97
TRIM41Q8WV44 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.97
TRIM41Q8WV44 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC39.82■■■■□ 3.97
TRIM41Q8WV44 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC39.82■■■■□ 3.97
TRIM41Q8WV44 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC39.82■■■■□ 3.97
TRIM41Q8WV44 MIR4281-201ENST00000580852 62 ntBASIC39.82■■■■□ 3.97
TRIM41Q8WV44 AC011551.1-201ENST00000614101 683 ntBASIC39.82■■■■□ 3.97
TRIM41Q8WV44 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.96
TRIM41Q8WV44 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.96
TRIM41Q8WV44 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC39.81■■■■□ 3.96
TRIM41Q8WV44 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC39.81■■■■□ 3.96
TRIM41Q8WV44 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC39.81■■■■□ 3.96
TRIM41Q8WV44 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC39.8■■■■□ 3.96
TRIM41Q8WV44 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC39.8■■■■□ 3.96
TRIM41Q8WV44 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
TRIM41Q8WV44 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC39.8■■■■□ 3.96
TRIM41Q8WV44 AK3-203ENST00000447596 705 ntTSL 2 BASIC39.8■■■■□ 3.96
TRIM41Q8WV44 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC39.8■■■■□ 3.96
TRIM41Q8WV44 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC39.8■■■■□ 3.96
TRIM41Q8WV44 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC39.8■■■■□ 3.96
TRIM41Q8WV44 AL136967.2-201ENST00000623968 743 ntBASIC39.79■■■■□ 3.96
TRIM41Q8WV44 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC39.78■■■■□ 3.96
TRIM41Q8WV44 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC39.78■■■■□ 3.96
TRIM41Q8WV44 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC39.78■■■■□ 3.96
TRIM41Q8WV44 SSSCA1-AS1-201ENST00000567594 614 ntBASIC39.78■■■■□ 3.96
TRIM41Q8WV44 GAK-223ENST00000628912 497 ntTSL 5 BASIC39.78■■■■□ 3.96
TRIM41Q8WV44 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC39.77■■■■□ 3.96
TRIM41Q8WV44 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC39.77■■■■□ 3.96
TRIM41Q8WV44 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.96
TRIM41Q8WV44 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC39.76■■■■□ 3.96
TRIM41Q8WV44 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC39.76■■■■□ 3.96
TRIM41Q8WV44 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC39.76■■■■□ 3.96
TRIM41Q8WV44 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC39.75■■■■□ 3.95
TRIM41Q8WV44 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC39.75■■■■□ 3.95
TRIM41Q8WV44 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC39.75■■■■□ 3.95
TRIM41Q8WV44 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC39.75■■■■□ 3.95
TRIM41Q8WV44 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC39.75■■■■□ 3.95
TRIM41Q8WV44 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC39.75■■■■□ 3.95
TRIM41Q8WV44 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC39.75■■■■□ 3.95
TRIM41Q8WV44 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC39.74■■■■□ 3.95
TRIM41Q8WV44 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
TRIM41Q8WV44 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
TRIM41Q8WV44 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC39.74■■■■□ 3.95
TRIM41Q8WV44 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
TRIM41Q8WV44 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC39.74■■■■□ 3.95
TRIM41Q8WV44 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
TRIM41Q8WV44 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC39.73■■■■□ 3.95
TRIM41Q8WV44 AC092437.1-201ENST00000624794 1048 ntBASIC39.73■■■■□ 3.95
TRIM41Q8WV44 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC39.73■■■■□ 3.95
TRIM41Q8WV44 HLA-L-209ENST00000420110 1011 ntBASIC39.72■■■■□ 3.95
TRIM41Q8WV44 AF213884.3-201ENST00000563833 479 ntBASIC39.72■■■■□ 3.95
TRIM41Q8WV44 SLC6A10P-202ENST00000431994 2058 ntBASIC39.72■■■■□ 3.95
TRIM41Q8WV44 MTDHP2-201ENST00000601468 714 ntBASIC39.71■■■■□ 3.95
TRIM41Q8WV44 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC39.71■■■■□ 3.95
TRIM41Q8WV44 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC39.71■■■■□ 3.95
TRIM41Q8WV44 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
TRIM41Q8WV44 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC39.7■■■■□ 3.95
TRIM41Q8WV44 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC39.7■■■■□ 3.95
TRIM41Q8WV44 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC39.7■■■■□ 3.95
TRIM41Q8WV44 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC39.69■■■■□ 3.94
TRIM41Q8WV44 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC39.69■■■■□ 3.94
TRIM41Q8WV44 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC39.69■■■■□ 3.94
TRIM41Q8WV44 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC39.69■■■■□ 3.94
TRIM41Q8WV44 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC39.68■■■■□ 3.94
TRIM41Q8WV44 AC024257.2-201ENST00000549699 147 ntBASIC39.68■■■■□ 3.94
TRIM41Q8WV44 AC090877.2-201ENST00000558441 1738 ntBASIC39.68■■■■□ 3.94
TRIM41Q8WV44 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC39.67■■■■□ 3.94
TRIM41Q8WV44 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC39.66■■■■□ 3.94
TRIM41Q8WV44 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC39.66■■■■□ 3.94
TRIM41Q8WV44 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC39.66■■■■□ 3.94
TRIM41Q8WV44 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC39.66■■■■□ 3.94
TRIM41Q8WV44 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC39.66■■■■□ 3.94
TRIM41Q8WV44 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC39.66■■■■□ 3.94
TRIM41Q8WV44 TMEM191A-211ENST00000637163 1067 ntBASIC39.66■■■■□ 3.94
TRIM41Q8WV44 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
TRIM41Q8WV44 CEBPA-AS1-201ENST00000592982 2198 ntBASIC39.65■■■■□ 3.94
TRIM41Q8WV44 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC39.65■■■■□ 3.94
TRIM41Q8WV44 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC39.64■■■■□ 3.94
TRIM41Q8WV44 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC39.64■■■■□ 3.94
TRIM41Q8WV44 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC39.64■■■■□ 3.94
TRIM41Q8WV44 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC39.64■■■■□ 3.94
TRIM41Q8WV44 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC39.64■■■■□ 3.94
TRIM41Q8WV44 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC39.64■■■■□ 3.94
TRIM41Q8WV44 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC39.64■■■■□ 3.94
TRIM41Q8WV44 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC39.63■■■■□ 3.93
TRIM41Q8WV44 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC39.63■■■■□ 3.93
TRIM41Q8WV44 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC39.63■■■■□ 3.93
TRIM41Q8WV44 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC39.62■■■■□ 3.93
TRIM41Q8WV44 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC39.62■■■■□ 3.93
TRIM41Q8WV44 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC39.62■■■■□ 3.93
TRIM41Q8WV44 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC39.62■■■■□ 3.93
TRIM41Q8WV44 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC39.62■■■■□ 3.93
TRIM41Q8WV44 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC39.62■■■■□ 3.93
TRIM41Q8WV44 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC39.61■■■■□ 3.93
TRIM41Q8WV44 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC39.61■■■■□ 3.93
TRIM41Q8WV44 AC004911.1-201ENST00000416316 871 ntBASIC39.61■■■■□ 3.93
TRIM41Q8WV44 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC39.61■■■■□ 3.93
TRIM41Q8WV44 AF131216.4-201ENST00000638924 1588 ntBASIC39.61■■■■□ 3.93
TRIM41Q8WV44 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC39.61■■■■□ 3.93
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms