Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NFE4Q86UQ8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NFE4Q86UQ8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
NFE4Q86UQ8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
NFE4Q86UQ8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFE4Q86UQ8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFE4Q86UQ8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NFE4Q86UQ8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFE4Q86UQ8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.39■□□□□ 0.21
NFE4Q86UQ8 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.39■□□□□ 0.21
NFE4Q86UQ8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
NFE4Q86UQ8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFE4Q86UQ8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFE4Q86UQ8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.39■□□□□ 0.21
NFE4Q86UQ8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFE4Q86UQ8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NFE4Q86UQ8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NFE4Q86UQ8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC16.38■□□□□ 0.21
NFE4Q86UQ8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.38■□□□□ 0.21
NFE4Q86UQ8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NFE4Q86UQ8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NFE4Q86UQ8 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.38■□□□□ 0.21
NFE4Q86UQ8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NFE4Q86UQ8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NFE4Q86UQ8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NFE4Q86UQ8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NFE4Q86UQ8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NFE4Q86UQ8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.37■□□□□ 0.21
NFE4Q86UQ8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NFE4Q86UQ8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NFE4Q86UQ8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NFE4Q86UQ8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.37■□□□□ 0.21
NFE4Q86UQ8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.37■□□□□ 0.21
NFE4Q86UQ8 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NFE4Q86UQ8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.37■□□□□ 0.21
NFE4Q86UQ8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.37■□□□□ 0.21
NFE4Q86UQ8 AC074183.2-201ENST00000623112 922 ntBASIC16.37■□□□□ 0.21
NFE4Q86UQ8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
NFE4Q86UQ8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NFE4Q86UQ8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NFE4Q86UQ8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.37■□□□□ 0.21
NFE4Q86UQ8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NFE4Q86UQ8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
NFE4Q86UQ8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.36■□□□□ 0.21
NFE4Q86UQ8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NFE4Q86UQ8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NFE4Q86UQ8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NFE4Q86UQ8 KRT18P10-201ENST00000388836 1287 ntBASIC16.36■□□□□ 0.21
NFE4Q86UQ8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NFE4Q86UQ8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.36■□□□□ 0.21
NFE4Q86UQ8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NFE4Q86UQ8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NFE4Q86UQ8 MIR6765-201ENST00000614092 87 ntBASIC16.36■□□□□ 0.21
NFE4Q86UQ8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NFE4Q86UQ8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
NFE4Q86UQ8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NFE4Q86UQ8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NFE4Q86UQ8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NFE4Q86UQ8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC16.35■□□□□ 0.21
NFE4Q86UQ8 AC139795.1-202ENST00000500444 432 ntBASIC16.35■□□□□ 0.21
NFE4Q86UQ8 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC16.35■□□□□ 0.21
NFE4Q86UQ8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.35■□□□□ 0.21
NFE4Q86UQ8 BHLHE23-202ENST00000612929 1109 ntBASIC16.35■□□□□ 0.21
NFE4Q86UQ8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.35■□□□□ 0.21
NFE4Q86UQ8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
NFE4Q86UQ8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.35■□□□□ 0.21
NFE4Q86UQ8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC16.35■□□□□ 0.21
NFE4Q86UQ8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
NFE4Q86UQ8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NFE4Q86UQ8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NFE4Q86UQ8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NFE4Q86UQ8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NFE4Q86UQ8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
NFE4Q86UQ8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NFE4Q86UQ8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NFE4Q86UQ8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NFE4Q86UQ8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NFE4Q86UQ8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NFE4Q86UQ8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NFE4Q86UQ8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NFE4Q86UQ8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
NFE4Q86UQ8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
NFE4Q86UQ8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
NFE4Q86UQ8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NFE4Q86UQ8 AC004812.2-201ENST00000611079 2094 ntBASIC16.33■□□□□ 0.21
NFE4Q86UQ8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.33■□□□□ 0.21
NFE4Q86UQ8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NFE4Q86UQ8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NFE4Q86UQ8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NFE4Q86UQ8 DUX4L9-201ENST00000449051 1259 ntBASIC16.33■□□□□ 0.2
NFE4Q86UQ8 DUX4L18-201ENST00000553347 1267 ntBASIC16.33■□□□□ 0.2
NFE4Q86UQ8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.33■□□□□ 0.2
NFE4Q86UQ8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NFE4Q86UQ8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NFE4Q86UQ8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NFE4Q86UQ8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NFE4Q86UQ8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.33■□□□□ 0.2
NFE4Q86UQ8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.33■□□□□ 0.2
NFE4Q86UQ8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
NFE4Q86UQ8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms