Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM53Q6P2H8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TMEM53Q6P2H8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM53Q6P2H8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.9■□□□□ 0.94
TMEM53Q6P2H8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM53Q6P2H8 AC096887.2-201ENST00000623443 1957 ntBASIC20.9■□□□□ 0.94
TMEM53Q6P2H8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TMEM53Q6P2H8 AL139125.2-201ENST00000623134 1869 ntBASIC20.9■□□□□ 0.94
TMEM53Q6P2H8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TMEM53Q6P2H8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM53Q6P2H8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM53Q6P2H8 MIR6765-201ENST00000614092 87 ntBASIC20.89■□□□□ 0.93
TMEM53Q6P2H8 AC129492.7-201ENST00000622992 756 ntBASIC20.89■□□□□ 0.93
TMEM53Q6P2H8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.89■□□□□ 0.93
TMEM53Q6P2H8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM53Q6P2H8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM53Q6P2H8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
TMEM53Q6P2H8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.88■□□□□ 0.93
TMEM53Q6P2H8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM53Q6P2H8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.88■□□□□ 0.93
TMEM53Q6P2H8 DUX4L9-201ENST00000449051 1259 ntBASIC20.88■□□□□ 0.93
TMEM53Q6P2H8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.88■□□□□ 0.93
TMEM53Q6P2H8 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM53Q6P2H8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM53Q6P2H8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM53Q6P2H8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.88■□□□□ 0.93
TMEM53Q6P2H8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TMEM53Q6P2H8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM53Q6P2H8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TMEM53Q6P2H8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.87■□□□□ 0.93
TMEM53Q6P2H8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM53Q6P2H8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM53Q6P2H8 LINC00565-201ENST00000562710 2331 ntBASIC20.87■□□□□ 0.93
TMEM53Q6P2H8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.87■□□□□ 0.93
TMEM53Q6P2H8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM53Q6P2H8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM53Q6P2H8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TMEM53Q6P2H8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM53Q6P2H8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.87■□□□□ 0.93
TMEM53Q6P2H8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM53Q6P2H8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM53Q6P2H8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
TMEM53Q6P2H8 SPCS2P3-201ENST00000500401 656 ntBASIC20.86■□□□□ 0.93
TMEM53Q6P2H8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM53Q6P2H8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM53Q6P2H8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM53Q6P2H8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM53Q6P2H8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM53Q6P2H8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM53Q6P2H8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
TMEM53Q6P2H8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM53Q6P2H8 AC097639.1-201ENST00000565519 1891 ntBASIC20.84■□□□□ 0.93
TMEM53Q6P2H8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.84■□□□□ 0.93
TMEM53Q6P2H8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM53Q6P2H8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
TMEM53Q6P2H8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TMEM53Q6P2H8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM53Q6P2H8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.83■□□□□ 0.93
TMEM53Q6P2H8 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.83■□□□□ 0.93
TMEM53Q6P2H8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.83■□□□□ 0.93
TMEM53Q6P2H8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TMEM53Q6P2H8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TMEM53Q6P2H8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TMEM53Q6P2H8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM53Q6P2H8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM53Q6P2H8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.82■□□□□ 0.92
TMEM53Q6P2H8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.82■□□□□ 0.92
TMEM53Q6P2H8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM53Q6P2H8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM53Q6P2H8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TMEM53Q6P2H8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM53Q6P2H8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM53Q6P2H8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM53Q6P2H8 AC012354.3-201ENST00000623734 483 ntBASIC20.81■□□□□ 0.92
TMEM53Q6P2H8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM53Q6P2H8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.81■□□□□ 0.92
TMEM53Q6P2H8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM53Q6P2H8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM53Q6P2H8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM53Q6P2H8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM53Q6P2H8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
TMEM53Q6P2H8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM53Q6P2H8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM53Q6P2H8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM53Q6P2H8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
TMEM53Q6P2H8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TMEM53Q6P2H8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.8■□□□□ 0.92
TMEM53Q6P2H8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TMEM53Q6P2H8 RPS2P7-201ENST00000447334 885 ntBASIC20.8■□□□□ 0.92
TMEM53Q6P2H8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM53Q6P2H8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM53Q6P2H8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM53Q6P2H8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM53Q6P2H8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TMEM53Q6P2H8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM53Q6P2H8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM53Q6P2H8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TMEM53Q6P2H8 ATP5G2P3-201ENST00000429083 425 ntBASIC20.79■□□□□ 0.92
TMEM53Q6P2H8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM53Q6P2H8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms