Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC28.17■■■□□ 2.1
RFX7Q2KHR2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
RFX7Q2KHR2 AC131281.2-201ENST00000520478 145 ntBASIC28.17■■■□□ 2.1
RFX7Q2KHR2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RFX7Q2KHR2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC28.16■■■□□ 2.1
RFX7Q2KHR2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC28.16■■■□□ 2.1
RFX7Q2KHR2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC28.16■■■□□ 2.1
RFX7Q2KHR2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC28.16■■■□□ 2.1
RFX7Q2KHR2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
RFX7Q2KHR2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC28.16■■■□□ 2.1
RFX7Q2KHR2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
RFX7Q2KHR2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
RFX7Q2KHR2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RFX7Q2KHR2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RFX7Q2KHR2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RFX7Q2KHR2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC28.14■■■□□ 2.1
RFX7Q2KHR2 AL117332.1-201ENST00000622628 974 ntBASIC28.14■■■□□ 2.1
RFX7Q2KHR2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
RFX7Q2KHR2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC28.14■■■□□ 2.1
RFX7Q2KHR2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
RFX7Q2KHR2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
RFX7Q2KHR2 AC008406.3-201ENST00000620001 1374 ntBASIC28.13■■■□□ 2.09
RFX7Q2KHR2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC28.13■■■□□ 2.09
RFX7Q2KHR2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC28.13■■■□□ 2.09
RFX7Q2KHR2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC28.13■■■□□ 2.09
RFX7Q2KHR2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC28.13■■■□□ 2.09
RFX7Q2KHR2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC28.13■■■□□ 2.09
RFX7Q2KHR2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
RFX7Q2KHR2 HLA-L-211ENST00000482052 1765 ntBASIC28.13■■■□□ 2.09
RFX7Q2KHR2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC28.12■■■□□ 2.09
RFX7Q2KHR2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC28.12■■■□□ 2.09
RFX7Q2KHR2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC28.12■■■□□ 2.09
RFX7Q2KHR2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
RFX7Q2KHR2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC28.12■■■□□ 2.09
RFX7Q2KHR2 AC141586.4-201ENST00000624558 1573 ntBASIC28.12■■■□□ 2.09
RFX7Q2KHR2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC28.12■■■□□ 2.09
RFX7Q2KHR2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC28.12■■■□□ 2.09
RFX7Q2KHR2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC28.11■■■□□ 2.09
RFX7Q2KHR2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RFX7Q2KHR2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC28.11■■■□□ 2.09
RFX7Q2KHR2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RFX7Q2KHR2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC28.11■■■□□ 2.09
RFX7Q2KHR2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC28.11■■■□□ 2.09
RFX7Q2KHR2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RFX7Q2KHR2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC28.1■■■□□ 2.09
RFX7Q2KHR2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
RFX7Q2KHR2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC28.1■■■□□ 2.09
RFX7Q2KHR2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
RFX7Q2KHR2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RFX7Q2KHR2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC28.1■■■□□ 2.09
RFX7Q2KHR2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC28.09■■■□□ 2.09
RFX7Q2KHR2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC28.09■■■□□ 2.09
RFX7Q2KHR2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
RFX7Q2KHR2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC28.09■■■□□ 2.09
RFX7Q2KHR2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
RFX7Q2KHR2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
RFX7Q2KHR2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
RFX7Q2KHR2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
RFX7Q2KHR2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
RFX7Q2KHR2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC28.08■■■□□ 2.09
RFX7Q2KHR2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
RFX7Q2KHR2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
RFX7Q2KHR2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
RFX7Q2KHR2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC28.08■■■□□ 2.09
RFX7Q2KHR2 AC010997.5-201ENST00000609182 354 ntBASIC28.08■■■□□ 2.09
RFX7Q2KHR2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
RFX7Q2KHR2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RFX7Q2KHR2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RFX7Q2KHR2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC28.07■■■□□ 2.08
RFX7Q2KHR2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
RFX7Q2KHR2 MTDHP2-201ENST00000601468 714 ntBASIC28.07■■■□□ 2.08
RFX7Q2KHR2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
RFX7Q2KHR2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
RFX7Q2KHR2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
RFX7Q2KHR2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
RFX7Q2KHR2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC28.06■■■□□ 2.08
RFX7Q2KHR2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
RFX7Q2KHR2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC28.06■■■□□ 2.08
RFX7Q2KHR2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RFX7Q2KHR2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
RFX7Q2KHR2 MIR3621-201ENST00000580529 85 ntBASIC28.06■■■□□ 2.08
RFX7Q2KHR2 MIR6724-1-201ENST00000616420 92 ntBASIC28.06■■■□□ 2.08
RFX7Q2KHR2 MIR6724-2-201ENST00000616483 92 ntBASIC28.06■■■□□ 2.08
RFX7Q2KHR2 MIR6724-4-201ENST00000617390 92 ntBASIC28.06■■■□□ 2.08
RFX7Q2KHR2 MIR6724-3-201ENST00000622482 92 ntBASIC28.06■■■□□ 2.08
RFX7Q2KHR2 LINC00543-201ENST00000567234 1845 ntBASIC28.06■■■□□ 2.08
RFX7Q2KHR2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
RFX7Q2KHR2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
RFX7Q2KHR2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
RFX7Q2KHR2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
RFX7Q2KHR2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RFX7Q2KHR2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RFX7Q2KHR2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RFX7Q2KHR2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC28.04■■■□□ 2.08
RFX7Q2KHR2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC28.04■■■□□ 2.08
RFX7Q2KHR2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RFX7Q2KHR2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC28.04■■■□□ 2.08
RFX7Q2KHR2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC28.04■■■□□ 2.08
RFX7Q2KHR2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RFX7Q2KHR2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms