Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SIRPAP78324 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.99■□□□□ 0.95
SIRPAP78324 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIRPAP78324 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SIRPAP78324 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIRPAP78324 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIRPAP78324 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIRPAP78324 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SIRPAP78324 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SIRPAP78324 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIRPAP78324 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.98■□□□□ 0.95
SIRPAP78324 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.98■□□□□ 0.95
SIRPAP78324 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIRPAP78324 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIRPAP78324 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIRPAP78324 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIRPAP78324 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIRPAP78324 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIRPAP78324 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIRPAP78324 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SIRPAP78324 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SIRPAP78324 GUSBP5-201ENST00000418136 578 ntBASIC20.97■□□□□ 0.95
SIRPAP78324 BX664725.1-201ENST00000438252 379 ntBASIC20.97■□□□□ 0.95
SIRPAP78324 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIRPAP78324 LINC00543-201ENST00000567234 1845 ntBASIC20.97■□□□□ 0.95
SIRPAP78324 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SIRPAP78324 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SIRPAP78324 KRT125P-201ENST00000546827 989 ntBASIC20.96■□□□□ 0.95
SIRPAP78324 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIRPAP78324 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SIRPAP78324 FOXO3B-201ENST00000395675 1928 ntBASIC20.96■□□□□ 0.95
SIRPAP78324 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIRPAP78324 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIRPAP78324 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SIRPAP78324 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIRPAP78324 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIRPAP78324 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SIRPAP78324 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIRPAP78324 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIRPAP78324 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SIRPAP78324 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SIRPAP78324 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIRPAP78324 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIRPAP78324 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SIRPAP78324 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SIRPAP78324 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SIRPAP78324 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.94■□□□□ 0.94
SIRPAP78324 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.94■□□□□ 0.94
SIRPAP78324 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SIRPAP78324 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
SIRPAP78324 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.93■□□□□ 0.94
SIRPAP78324 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.93■□□□□ 0.94
SIRPAP78324 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SIRPAP78324 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIRPAP78324 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIRPAP78324 Z92544.1-202ENST00000571933 1220 ntBASIC20.93■□□□□ 0.94
SIRPAP78324 MIR4281-201ENST00000580852 62 ntBASIC20.93■□□□□ 0.94
SIRPAP78324 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SIRPAP78324 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIRPAP78324 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIRPAP78324 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIRPAP78324 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.93■□□□□ 0.94
SIRPAP78324 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIRPAP78324 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SIRPAP78324 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SIRPAP78324 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.92■□□□□ 0.94
SIRPAP78324 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIRPAP78324 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.92■□□□□ 0.94
SIRPAP78324 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SIRPAP78324 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SIRPAP78324 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.92■□□□□ 0.94
SIRPAP78324 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIRPAP78324 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SIRPAP78324 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SIRPAP78324 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIRPAP78324 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SIRPAP78324 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIRPAP78324 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SIRPAP78324 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SIRPAP78324 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SIRPAP78324 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SIRPAP78324 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SIRPAP78324 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.91■□□□□ 0.94
SIRPAP78324 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SIRPAP78324 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SIRPAP78324 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SIRPAP78324 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SIRPAP78324 AC141586.4-201ENST00000624558 1573 ntBASIC20.9■□□□□ 0.94
SIRPAP78324 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SIRPAP78324 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.9■□□□□ 0.94
SIRPAP78324 MIR4787-201ENST00000607364 84 ntBASIC20.9■□□□□ 0.94
SIRPAP78324 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.9■□□□□ 0.94
SIRPAP78324 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SIRPAP78324 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SIRPAP78324 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SIRPAP78324 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SIRPAP78324 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
SIRPAP78324 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
SIRPAP78324 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SIRPAP78324 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms