Protein–RNA interactions for Protein: P39748

FEN1, Flap endonuclease 1, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FEN1P39748 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
FEN1P39748 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.9■■□□□ 1.1
FEN1P39748 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
FEN1P39748 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
FEN1P39748 KRT8P33-201ENST00000508125 1423 ntBASIC21.89■■□□□ 1.1
FEN1P39748 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.1
FEN1P39748 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.1
FEN1P39748 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.89■■□□□ 1.09
FEN1P39748 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.89■■□□□ 1.09
FEN1P39748 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.89■■□□□ 1.09
FEN1P39748 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
FEN1P39748 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
FEN1P39748 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.89■■□□□ 1.09
FEN1P39748 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.89■■□□□ 1.09
FEN1P39748 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
FEN1P39748 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.89■■□□□ 1.09
FEN1P39748 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
FEN1P39748 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
FEN1P39748 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
FEN1P39748 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FEN1P39748 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.88■■□□□ 1.09
FEN1P39748 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.88■■□□□ 1.09
FEN1P39748 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
FEN1P39748 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FEN1P39748 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FEN1P39748 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
FEN1P39748 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FEN1P39748 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.88■■□□□ 1.09
FEN1P39748 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FEN1P39748 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
FEN1P39748 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FEN1P39748 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.87■■□□□ 1.09
FEN1P39748 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.87■■□□□ 1.09
FEN1P39748 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.87■■□□□ 1.09
FEN1P39748 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
FEN1P39748 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
FEN1P39748 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
FEN1P39748 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.87■■□□□ 1.09
FEN1P39748 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.87■■□□□ 1.09
FEN1P39748 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
FEN1P39748 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.87■■□□□ 1.09
FEN1P39748 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.87■■□□□ 1.09
FEN1P39748 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.86■■□□□ 1.09
FEN1P39748 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
FEN1P39748 LINC00543-201ENST00000567234 1845 ntBASIC21.86■■□□□ 1.09
FEN1P39748 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
FEN1P39748 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FEN1P39748 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FEN1P39748 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
FEN1P39748 AC103834.1-201ENST00000520383 144 ntBASIC21.85■■□□□ 1.09
FEN1P39748 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
FEN1P39748 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
FEN1P39748 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.85■■□□□ 1.09
FEN1P39748 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
FEN1P39748 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FEN1P39748 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
FEN1P39748 AC120024.1-201ENST00000562672 995 ntBASIC21.84■■□□□ 1.09
FEN1P39748 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
FEN1P39748 AC011551.1-201ENST00000614101 683 ntBASIC21.84■■□□□ 1.09
FEN1P39748 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.84■■□□□ 1.09
FEN1P39748 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
FEN1P39748 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
FEN1P39748 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
FEN1P39748 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
FEN1P39748 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
FEN1P39748 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
FEN1P39748 MIR4508-201ENST00000584178 70 ntBASIC21.83■■□□□ 1.09
FEN1P39748 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.83■■□□□ 1.09
FEN1P39748 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
FEN1P39748 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
FEN1P39748 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
FEN1P39748 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
FEN1P39748 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.83■■□□□ 1.08
FEN1P39748 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
FEN1P39748 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
FEN1P39748 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.82■■□□□ 1.08
FEN1P39748 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FEN1P39748 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FEN1P39748 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
FEN1P39748 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
FEN1P39748 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.82■■□□□ 1.08
FEN1P39748 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.82■■□□□ 1.08
FEN1P39748 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
FEN1P39748 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FEN1P39748 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.82■■□□□ 1.08
FEN1P39748 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.82■■□□□ 1.08
FEN1P39748 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FEN1P39748 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
FEN1P39748 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.81■■□□□ 1.08
FEN1P39748 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
FEN1P39748 YBX1P4-201ENST00000392794 808 ntBASIC21.81■■□□□ 1.08
FEN1P39748 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.81■■□□□ 1.08
FEN1P39748 THA1P-201ENST00000590384 1145 ntBASIC21.81■■□□□ 1.08
FEN1P39748 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
FEN1P39748 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FEN1P39748 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.81■■□□□ 1.08
FEN1P39748 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
FEN1P39748 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.8■■□□□ 1.08
FEN1P39748 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
FEN1P39748 AC141586.4-201ENST00000624558 1573 ntBASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms