Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.01■□□□□ 0.79
NGFP01138 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.01■□□□□ 0.79
NGFP01138 AF131216.4-201ENST00000638924 1588 ntBASIC20■□□□□ 0.79
NGFP01138 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20■□□□□ 0.79
NGFP01138 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20■□□□□ 0.79
NGFP01138 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NGFP01138 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
NGFP01138 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NGFP01138 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
NGFP01138 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20■□□□□ 0.79
NGFP01138 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NGFP01138 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NGFP01138 LINC00543-201ENST00000567234 1845 ntBASIC19.99■□□□□ 0.79
NGFP01138 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NGFP01138 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NGFP01138 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NGFP01138 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.99■□□□□ 0.79
NGFP01138 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.99■□□□□ 0.79
NGFP01138 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NGFP01138 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.99■□□□□ 0.79
NGFP01138 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
NGFP01138 AL451085.2-201ENST00000605085 799 ntBASIC19.99■□□□□ 0.79
NGFP01138 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NGFP01138 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NGFP01138 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.99■□□□□ 0.79
NGFP01138 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.98■□□□□ 0.79
NGFP01138 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.98■□□□□ 0.79
NGFP01138 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.98■□□□□ 0.79
NGFP01138 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NGFP01138 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NGFP01138 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NGFP01138 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.98■□□□□ 0.79
NGFP01138 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NGFP01138 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NGFP01138 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NGFP01138 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NGFP01138 AC093323.1-202ENST00000635031 2045 ntBASIC19.98■□□□□ 0.79
NGFP01138 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NGFP01138 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
NGFP01138 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NGFP01138 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NGFP01138 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NGFP01138 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NGFP01138 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.97■□□□□ 0.79
NGFP01138 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
NGFP01138 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NGFP01138 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NGFP01138 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NGFP01138 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.97■□□□□ 0.79
NGFP01138 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NGFP01138 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.97■□□□□ 0.79
NGFP01138 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
NGFP01138 AC137630.3-201ENST00000607245 391 ntBASIC19.96■□□□□ 0.79
NGFP01138 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
NGFP01138 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
NGFP01138 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.96■□□□□ 0.79
NGFP01138 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NGFP01138 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NGFP01138 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.95■□□□□ 0.78
NGFP01138 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NGFP01138 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NGFP01138 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NGFP01138 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.95■□□□□ 0.78
NGFP01138 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NGFP01138 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NGFP01138 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NGFP01138 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NGFP01138 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NGFP01138 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NGFP01138 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NGFP01138 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NGFP01138 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.94■□□□□ 0.78
NGFP01138 AC009299.2-201ENST00000482477 511 ntBASIC19.94■□□□□ 0.78
NGFP01138 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.94■□□□□ 0.78
NGFP01138 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NGFP01138 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NGFP01138 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NGFP01138 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NGFP01138 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
NGFP01138 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NGFP01138 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NGFP01138 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.94■□□□□ 0.78
NGFP01138 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
NGFP01138 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NGFP01138 AC004812.2-201ENST00000611079 2094 ntBASIC19.93■□□□□ 0.78
NGFP01138 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NGFP01138 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
NGFP01138 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.93■□□□□ 0.78
NGFP01138 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.93■□□□□ 0.78
NGFP01138 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.93■□□□□ 0.78
NGFP01138 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.93■□□□□ 0.78
NGFP01138 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NGFP01138 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NGFP01138 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.93■□□□□ 0.78
NGFP01138 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NGFP01138 AC131274.2-201ENST00000580697 1507 ntBASIC19.92■□□□□ 0.78
NGFP01138 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NGFP01138 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NGFP01138 AC141586.4-201ENST00000624558 1573 ntBASIC19.92■□□□□ 0.78
NGFP01138 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms