Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SPDYE4A6NLX3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SPDYE4A6NLX3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SPDYE4A6NLX3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SPDYE4A6NLX3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SPDYE4A6NLX3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.67■■□□□ 1.7
SPDYE4A6NLX3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SPDYE4A6NLX3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.67■■□□□ 1.7
SPDYE4A6NLX3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
SPDYE4A6NLX3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SPDYE4A6NLX3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
SPDYE4A6NLX3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SPDYE4A6NLX3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC25.66■■□□□ 1.7
SPDYE4A6NLX3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.66■■□□□ 1.7
SPDYE4A6NLX3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SPDYE4A6NLX3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.66■■□□□ 1.7
SPDYE4A6NLX3 KRT125P-201ENST00000546827 989 ntBASIC25.66■■□□□ 1.7
SPDYE4A6NLX3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SPDYE4A6NLX3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
SPDYE4A6NLX3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SPDYE4A6NLX3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SPDYE4A6NLX3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.66■■□□□ 1.7
SPDYE4A6NLX3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SPDYE4A6NLX3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SPDYE4A6NLX3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SPDYE4A6NLX3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SPDYE4A6NLX3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SPDYE4A6NLX3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SPDYE4A6NLX3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.64■■□□□ 1.7
SPDYE4A6NLX3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
SPDYE4A6NLX3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SPDYE4A6NLX3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.63■■□□□ 1.69
SPDYE4A6NLX3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SPDYE4A6NLX3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
SPDYE4A6NLX3 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.63■■□□□ 1.69
SPDYE4A6NLX3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.63■■□□□ 1.69
SPDYE4A6NLX3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SPDYE4A6NLX3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.63■■□□□ 1.69
SPDYE4A6NLX3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SPDYE4A6NLX3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SPDYE4A6NLX3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SPDYE4A6NLX3 LONRF2P2-201ENST00000439212 571 ntBASIC25.62■■□□□ 1.69
SPDYE4A6NLX3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SPDYE4A6NLX3 Z92544.1-202ENST00000571933 1220 ntBASIC25.62■■□□□ 1.69
SPDYE4A6NLX3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
SPDYE4A6NLX3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SPDYE4A6NLX3 AL024507.2-201ENST00000606070 2574 ntBASIC25.61■■□□□ 1.69
SPDYE4A6NLX3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SPDYE4A6NLX3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SPDYE4A6NLX3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.61■■□□□ 1.69
SPDYE4A6NLX3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.61■■□□□ 1.69
SPDYE4A6NLX3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SPDYE4A6NLX3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SPDYE4A6NLX3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SPDYE4A6NLX3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SPDYE4A6NLX3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SPDYE4A6NLX3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SPDYE4A6NLX3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SPDYE4A6NLX3 BX664725.1-201ENST00000438252 379 ntBASIC25.6■■□□□ 1.69
SPDYE4A6NLX3 AC022211.4-201ENST00000625094 2161 ntBASIC25.6■■□□□ 1.69
SPDYE4A6NLX3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
SPDYE4A6NLX3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SPDYE4A6NLX3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
SPDYE4A6NLX3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SPDYE4A6NLX3 AC008406.3-201ENST00000620001 1374 ntBASIC25.59■■□□□ 1.69
SPDYE4A6NLX3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
SPDYE4A6NLX3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
SPDYE4A6NLX3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SPDYE4A6NLX3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.59■■□□□ 1.69
SPDYE4A6NLX3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.59■■□□□ 1.69
SPDYE4A6NLX3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SPDYE4A6NLX3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.59■■□□□ 1.69
SPDYE4A6NLX3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.59■■□□□ 1.69
SPDYE4A6NLX3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.59■■□□□ 1.69
SPDYE4A6NLX3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.59■■□□□ 1.69
SPDYE4A6NLX3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SPDYE4A6NLX3 KRT18P10-201ENST00000388836 1287 ntBASIC25.58■■□□□ 1.69
SPDYE4A6NLX3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.58■■□□□ 1.69
SPDYE4A6NLX3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SPDYE4A6NLX3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SPDYE4A6NLX3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
SPDYE4A6NLX3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.57■■□□□ 1.68
SPDYE4A6NLX3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.57■■□□□ 1.68
SPDYE4A6NLX3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SPDYE4A6NLX3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SPDYE4A6NLX3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.56■■□□□ 1.68
SPDYE4A6NLX3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SPDYE4A6NLX3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
SPDYE4A6NLX3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SPDYE4A6NLX3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SPDYE4A6NLX3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SPDYE4A6NLX3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.56■■□□□ 1.68
SPDYE4A6NLX3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
SPDYE4A6NLX3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SPDYE4A6NLX3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.56■■□□□ 1.68
SPDYE4A6NLX3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SPDYE4A6NLX3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SPDYE4A6NLX3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SPDYE4A6NLX3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SPDYE4A6NLX3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms