Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 AKR1C7P-201ENST00000305623 895 ntBASIC14.56□□□□□ -0.08
AP4S1Q9Y587 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 AC136604.1-201ENST00000418535 575 ntBASIC14.56□□□□□ -0.08
AP4S1Q9Y587 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.56□□□□□ -0.08
AP4S1Q9Y587 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 AC091304.2-201ENST00000564639 760 ntBASIC14.56□□□□□ -0.08
AP4S1Q9Y587 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 TSPY19P-201ENST00000418461 509 ntBASIC14.55□□□□□ -0.08
AP4S1Q9Y587 TSPY18P-201ENST00000441642 509 ntBASIC14.55□□□□□ -0.08
AP4S1Q9Y587 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 RNPS1P1-201ENST00000507437 918 ntBASIC14.55□□□□□ -0.08
AP4S1Q9Y587 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
AP4S1Q9Y587 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.54□□□□□ -0.08
AP4S1Q9Y587 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms