Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX6-2Q9C056 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 MIR193BHG-211ENST00000641433 5365 ntBASIC12.48□□□□□ -0.41
NKX6-2Q9C056 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 AC129492.6-201ENST00000611383 1305 ntBASIC12.48□□□□□ -0.41
NKX6-2Q9C056 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 DRAXINP1-201ENST00000437611 948 ntBASIC12.48□□□□□ -0.41
NKX6-2Q9C056 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 AC063952.2-201ENST00000498792 1227 ntBASIC12.48□□□□□ -0.41
NKX6-2Q9C056 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 NDUFV2-AS1-203ENST00000608008 779 ntBASIC12.48□□□□□ -0.41
NKX6-2Q9C056 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 AC011700.1-201ENST00000610409 2627 ntBASIC12.48□□□□□ -0.41
NKX6-2Q9C056 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NKX6-2Q9C056 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX6-2Q9C056 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms