Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 LSS-211ENST00000522411 2523 ntTSL 2 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 GPAA1P2-202ENST00000606848 1787 ntBASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 PC-214ENST00000628663 1470 ntTSL 5 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 HTR5BP-201ENST00000430851 1154 ntBASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 CCND1-203ENST00000536559 553 ntTSL 3 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 MIR4469-201ENST00000583919 79 ntBASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 AQP6-205ENST00000618286 829 ntTSL 5 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 AL513190.1-201ENST00000621254 727 ntBASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 AC092865.6-201ENST00000642101 219 ntBASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 AOC4P-203ENST00000566825 2289 ntBASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NDUFAF3Q9BU61 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NDUFAF3Q9BU61 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
NDUFAF3Q9BU61 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NDUFAF3Q9BU61 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
NDUFAF3Q9BU61 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC11.97□□□□□ -0.49
NDUFAF3Q9BU61 EML1-203ENST00000334192 4064 ntTSL 5 BASIC11.97□□□□□ -0.49
NDUFAF3Q9BU61 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
NDUFAF3Q9BU61 AL512652.2-201ENST00000625156 1716 ntBASIC11.97□□□□□ -0.49
NDUFAF3Q9BU61 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC11.97□□□□□ -0.49
NDUFAF3Q9BU61 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC11.97□□□□□ -0.49
NDUFAF3Q9BU61 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
NDUFAF3Q9BU61 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
NDUFAF3Q9BU61 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
NDUFAF3Q9BU61 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NDUFAF3Q9BU61 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
NDUFAF3Q9BU61 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC11.97□□□□□ -0.49
NDUFAF3Q9BU61 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NDUFAF3Q9BU61 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NDUFAF3Q9BU61 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
NDUFAF3Q9BU61 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
NDUFAF3Q9BU61 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NDUFAF3Q9BU61 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
NDUFAF3Q9BU61 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms