Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 KRT8P37-201ENST00000451609 1420 ntBASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 AL035456.1-201ENST00000456064 1369 ntBASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 AC087386.2-201ENST00000623212 4637 ntBASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 RPL5P21-201ENST00000404620 815 ntBASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 AL512356.2-201ENST00000546955 174 ntBASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 LINC00628-201ENST00000628516 1289 ntBASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTN4IP1Q8WWV3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 TSEN15P1-201ENST00000423257 515 ntBASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 HLA-J-203ENST00000494367 1087 ntBASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 BANF1P1-201ENST00000553684 263 ntBASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.97□□□□□ -0.33
RTN4IP1Q8WWV3 MIR4453-201ENST00000584019 89 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms