Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15□□□□□ -0.01
HIPK4Q8NE63 AC068137.2-201ENST00000605408 478 ntBASIC15□□□□□ -0.01
HIPK4Q8NE63 AC064836.3-201ENST00000607928 673 ntBASIC15□□□□□ -0.01
HIPK4Q8NE63 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15□□□□□ -0.01
HIPK4Q8NE63 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIPK4Q8NE63 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIPK4Q8NE63 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HIPK4Q8NE63 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HIPK4Q8NE63 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIPK4Q8NE63 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HIPK4Q8NE63 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15□□□□□ -0.01
HIPK4Q8NE63 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HIPK4Q8NE63 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIPK4Q8NE63 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
HIPK4Q8NE63 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
HIPK4Q8NE63 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HIPK4Q8NE63 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIPK4Q8NE63 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15□□□□□ -0.01
HIPK4Q8NE63 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIPK4Q8NE63 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIPK4Q8NE63 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 CICP8-201ENST00000455800 2813 ntBASIC14.99□□□□□ -0.01
HIPK4Q8NE63 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 ACE3P-201ENST00000423435 1973 ntBASIC14.99□□□□□ -0.01
HIPK4Q8NE63 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 AC002056.1-201ENST00000395613 760 ntBASIC14.99□□□□□ -0.01
HIPK4Q8NE63 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 AL645939.2-201ENST00000427340 991 ntBASIC14.99□□□□□ -0.01
HIPK4Q8NE63 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 AL031595.1-201ENST00000623969 4709 ntBASIC14.99□□□□□ -0.01
HIPK4Q8NE63 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HIPK4Q8NE63 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 REXO1L1P-202ENST00000608646 1974 ntBASIC14.98□□□□□ -0.01
HIPK4Q8NE63 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 BEND3P1-201ENST00000421591 1944 ntBASIC14.98□□□□□ -0.01
HIPK4Q8NE63 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.98□□□□□ -0.01
HIPK4Q8NE63 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms