Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 FO393414.2-201ENST00000405153 598 ntBASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 FAM58CP-201ENST00000435741 640 ntBASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 AC079140.1-201ENST00000508039 487 ntBASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 RNA5SP416-201ENST00000516838 111 ntBASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 AC012508.2-201ENST00000567613 1472 ntBASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 UXT-AS1-201ENST00000590504 1525 ntBASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 AC092902.6-201ENST00000641783 218 ntBASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
NUDCD3Q8IVD9 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 KRT8P48-201ENST00000515599 1220 ntBASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 RARRES2P9-201ENST00000565168 469 ntBASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.29■□□□□ 0.04
NUDCD3Q8IVD9 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 AL928921.2-201ENST00000641325 2442 ntBASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 AP001267.2-201ENST00000532619 2086 ntBASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NUDCD3Q8IVD9 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms