Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC28Q86X40 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 AP3S2-216ENST00000617003 1561 ntBASIC13.74□□□□□ -0.21
LRRC28Q86X40 AC126335.2-201ENST00000623362 4637 ntBASIC13.74□□□□□ -0.21
LRRC28Q86X40 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 FOXO1B-201ENST00000504678 1527 ntBASIC13.74□□□□□ -0.21
LRRC28Q86X40 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC28Q86X40 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC28Q86X40 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC28Q86X40 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC28Q86X40 INTS4P1-203ENST00000641008 3683 ntBASIC13.74□□□□□ -0.21
LRRC28Q86X40 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.73□□□□□ -0.21
LRRC28Q86X40 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
LRRC28Q86X40 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRC28Q86X40 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
LRRC28Q86X40 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
LRRC28Q86X40 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.73□□□□□ -0.21
LRRC28Q86X40 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.73□□□□□ -0.21
LRRC28Q86X40 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRC28Q86X40 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRC28Q86X40 RARRES2P9-201ENST00000565168 469 ntBASIC13.73□□□□□ -0.21
LRRC28Q86X40 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.73□□□□□ -0.21
LRRC28Q86X40 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.73□□□□□ -0.21
LRRC28Q86X40 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.73□□□□□ -0.21
LRRC28Q86X40 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LRRC28Q86X40 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
LRRC28Q86X40 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRC28Q86X40 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
LRRC28Q86X40 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRC28Q86X40 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRC28Q86X40 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRRC28Q86X40 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRRC28Q86X40 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRRC28Q86X40 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRC28Q86X40 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRC28Q86X40 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRC28Q86X40 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRRC28Q86X40 TUBB3P1-201ENST00000405796 1332 ntBASIC13.72□□□□□ -0.21
LRRC28Q86X40 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRC28Q86X40 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRC28Q86X40 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 FAM220BP-201ENST00000377689 816 ntBASIC13.72□□□□□ -0.21
LRRC28Q86X40 HLA-H-201ENST00000383620 1096 ntBASIC13.72□□□□□ -0.21
LRRC28Q86X40 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.72□□□□□ -0.21
LRRC28Q86X40 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRC28Q86X40 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRRC28Q86X40 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 AL355385.1-201ENST00000606123 409 ntBASIC13.72□□□□□ -0.21
LRRC28Q86X40 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRC28Q86X40 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRC28Q86X40 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRC28Q86X40 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRC28Q86X40 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRC28Q86X40 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.72□□□□□ -0.21
LRRC28Q86X40 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms