Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GABRA4P48169 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GABRA4P48169 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GABRA4P48169 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
GABRA4P48169 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.47□□□□□ -0.09
GABRA4P48169 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.47□□□□□ -0.09
GABRA4P48169 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.47□□□□□ -0.09
GABRA4P48169 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.46□□□□□ -0.09
GABRA4P48169 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
GABRA4P48169 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.46□□□□□ -0.09
GABRA4P48169 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GABRA4P48169 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.46□□□□□ -0.09
GABRA4P48169 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
GABRA4P48169 TUBB1P2-201ENST00000422712 1306 ntBASIC14.46□□□□□ -0.09
GABRA4P48169 TUBB1P1-201ENST00000503144 1300 ntBASIC14.46□□□□□ -0.09
GABRA4P48169 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GABRA4P48169 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.46□□□□□ -0.09
GABRA4P48169 PPT1-215ENST00000641471 2368 ntBASIC14.46□□□□□ -0.09
GABRA4P48169 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
GABRA4P48169 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
GABRA4P48169 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
GABRA4P48169 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GABRA4P48169 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GABRA4P48169 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GABRA4P48169 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GABRA4P48169 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GABRA4P48169 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.09
GABRA4P48169 TPM3P8-201ENST00000330554 643 ntBASIC14.46□□□□□ -0.09
GABRA4P48169 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GABRA4P48169 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.46□□□□□ -0.09
GABRA4P48169 FAM21FP-201ENST00000426241 1131 ntBASIC14.46□□□□□ -0.09
GABRA4P48169 YBX1P6-201ENST00000442962 1002 ntBASIC14.46□□□□□ -0.09
GABRA4P48169 AC026434.2-201ENST00000506094 1078 ntBASIC14.46□□□□□ -0.09
GABRA4P48169 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.46□□□□□ -0.09
GABRA4P48169 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.46□□□□□ -0.09
GABRA4P48169 AP003171.2-201ENST00000528208 925 ntBASIC14.46□□□□□ -0.09
GABRA4P48169 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GABRA4P48169 AC023310.1-201ENST00000554836 735 ntBASIC14.46□□□□□ -0.09
GABRA4P48169 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.46□□□□□ -0.09
GABRA4P48169 C2orf69P2-201ENST00000562032 1123 ntBASIC14.46□□□□□ -0.09
GABRA4P48169 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.46□□□□□ -0.09
GABRA4P48169 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.46□□□□□ -0.09
GABRA4P48169 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
GABRA4P48169 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
GABRA4P48169 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
GABRA4P48169 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GABRA4P48169 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.46□□□□□ -0.09
GABRA4P48169 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
GABRA4P48169 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.46□□□□□ -0.1
GABRA4P48169 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
GABRA4P48169 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.46□□□□□ -0.1
GABRA4P48169 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
GABRA4P48169 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
GABRA4P48169 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
GABRA4P48169 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
GABRA4P48169 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.46□□□□□ -0.1
GABRA4P48169 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
GABRA4P48169 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.45□□□□□ -0.1
GABRA4P48169 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.45□□□□□ -0.1
GABRA4P48169 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.45□□□□□ -0.1
GABRA4P48169 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 MIR1908-201ENST00000410394 80 ntBASIC14.45□□□□□ -0.1
GABRA4P48169 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.45□□□□□ -0.1
GABRA4P48169 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.45□□□□□ -0.1
GABRA4P48169 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.45□□□□□ -0.1
GABRA4P48169 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.45□□□□□ -0.1
GABRA4P48169 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.45□□□□□ -0.1
GABRA4P48169 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.45□□□□□ -0.1
GABRA4P48169 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.45□□□□□ -0.1
GABRA4P48169 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.45□□□□□ -0.1
GABRA4P48169 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 LINC00554-201ENST00000564841 3011 ntBASIC14.45□□□□□ -0.1
GABRA4P48169 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
GABRA4P48169 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
GABRA4P48169 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GABRA4P48169 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GABRA4P48169 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GABRA4P48169 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms