Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NCLP19338 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NCLP19338 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCLP19338 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCLP19338 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCLP19338 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.39■□□□□ 0.53
NCLP19338 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCLP19338 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCLP19338 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.39■□□□□ 0.53
NCLP19338 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCLP19338 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.39■□□□□ 0.53
NCLP19338 AC004461.1-201ENST00000412461 403 ntBASIC18.39■□□□□ 0.53
NCLP19338 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NCLP19338 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.39■□□□□ 0.53
NCLP19338 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.39■□□□□ 0.53
NCLP19338 MIR4313-201ENST00000580760 101 ntBASIC18.39■□□□□ 0.53
NCLP19338 AC022145.2-201ENST00000598203 171 ntBASIC18.39■□□□□ 0.53
NCLP19338 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.39■□□□□ 0.53
NCLP19338 AC004835.2-201ENST00000603762 682 ntBASIC18.39■□□□□ 0.53
NCLP19338 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.39■□□□□ 0.53
NCLP19338 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.39■□□□□ 0.53
NCLP19338 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCLP19338 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCLP19338 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCLP19338 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCLP19338 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCLP19338 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
NCLP19338 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.39■□□□□ 0.53
NCLP19338 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCLP19338 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
NCLP19338 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCLP19338 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCLP19338 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCLP19338 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
NCLP19338 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCLP19338 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCLP19338 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
NCLP19338 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NCLP19338 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCLP19338 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCLP19338 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
NCLP19338 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCLP19338 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC18.38■□□□□ 0.53
NCLP19338 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.38■□□□□ 0.53
NCLP19338 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCLP19338 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCLP19338 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.38■□□□□ 0.53
NCLP19338 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCLP19338 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCLP19338 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCLP19338 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCLP19338 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCLP19338 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
NCLP19338 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.38■□□□□ 0.53
NCLP19338 AL355306.1-201ENST00000415580 579 ntBASIC18.38■□□□□ 0.53
NCLP19338 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.38■□□□□ 0.53
NCLP19338 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NCLP19338 AC098859.1-201ENST00000502915 1238 ntBASIC18.38■□□□□ 0.53
NCLP19338 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.38■□□□□ 0.53
NCLP19338 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.38■□□□□ 0.53
NCLP19338 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.38■□□□□ 0.53
NCLP19338 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC18.38■□□□□ 0.53
NCLP19338 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.38■□□□□ 0.53
NCLP19338 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC18.38■□□□□ 0.53
NCLP19338 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC18.38■□□□□ 0.53
NCLP19338 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.38■□□□□ 0.53
NCLP19338 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCLP19338 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC18.38■□□□□ 0.53
NCLP19338 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NCLP19338 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NCLP19338 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCLP19338 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC18.38■□□□□ 0.53
NCLP19338 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC18.38■□□□□ 0.53
NCLP19338 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCLP19338 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
NCLP19338 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NCLP19338 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NCLP19338 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.37■□□□□ 0.53
NCLP19338 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCLP19338 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCLP19338 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NCLP19338 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
NCLP19338 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.37■□□□□ 0.53
NCLP19338 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
NCLP19338 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCLP19338 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
NCLP19338 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.37■□□□□ 0.53
NCLP19338 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.37■□□□□ 0.53
NCLP19338 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.37■□□□□ 0.53
NCLP19338 AC024267.1-201ENST00000582320 895 ntBASIC18.37■□□□□ 0.53
NCLP19338 LINC02084-201ENST00000606069 1096 ntBASIC18.37■□□□□ 0.53
NCLP19338 AL355385.1-201ENST00000606123 409 ntBASIC18.37■□□□□ 0.53
NCLP19338 SPTSSB-204ENST00000617024 1292 ntBASIC18.37■□□□□ 0.53
NCLP19338 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCLP19338 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.37■□□□□ 0.53
NCLP19338 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
NCLP19338 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCLP19338 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NCLP19338 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NCLP19338 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms